RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 ZNF688P0C7X2 276 aa18.01■□□□□ 0.47
SNTA1-201ENST00000217381 GATA3P23771 443 aa18.01■□□□□ 0.47
SNTA1-201ENST00000217381 ODF3Q96PU9 254 aa18.01■□□□□ 0.47
SNTA1-201ENST00000217381 A0A096LNT2 108 aa18■□□□□ 0.47
SNTA1-201ENST00000217381 IGIPA6NJ69 53 aa18■□□□□ 0.47
SNTA1-201ENST00000217381 ZNF479Q96JC4 524 aa18■□□□□ 0.47
SNTA1-201ENST00000217381 A0A1B0GWB2 263 aa17.99■□□□□ 0.47
SNTA1-201ENST00000217381 C9orf85Q96MD7 179 aa17.99■□□□□ 0.47
SNTA1-201ENST00000217381 KMT2BQ9UMN6 2715 aaPredicted RBP17.99■□□□□ 0.47
SNTA1-201ENST00000217381 LRRK2Q5S007 2527 aa17.99■□□□□ 0.47
SNTA1-201ENST00000217381 IGLV4-69A0A075B6H9 119 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 IGHV3-16A0A0C4DH30 117 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 A0A0J9YX75 114 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 LINC01549A6NIU2 74 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 VCYO14598 125 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 COX6B1P14854 86 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 DSCR9P59020 149 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 FAM208BQ5VWN6 2430 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 LGALS9O00182 355 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 FOXI2Q6ZQN5 318 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 DEFB104AQ8WTQ1 72 aa17.98■□□□□ 0.47
SNTA1-201ENST00000217381 CSPG4Q6UVK1 2322 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 F5H697 171 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 KIR2DL4Q99706 377 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 TRAV12-2A0A075B6T6 113 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 TMEM89A2RUT3 159 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 SDHAF1A6NFY7 115 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 C11orf86A6NJI1 115 aa17.97■□□□□ 0.47
SNTA1-201ENST00000217381 RPL39P62891 51 aaKnown RBP17.97■□□□□ 0.47
SNTA1-201ENST00000217381 ZNF815PA8K554 130 aa17.96■□□□□ 0.47
SNTA1-201ENST00000217381 K7EQG2 157 aa17.96■□□□□ 0.47
SNTA1-201ENST00000217381 SNRPD3P62318 126 aaKnown RBP17.96■□□□□ 0.47
SNTA1-201ENST00000217381 MDFICQ9P1T7 246 aa17.96■□□□□ 0.47
SNTA1-201ENST00000217381 IGKV3-20P01619 116 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 LINC01356Q8N9X3 169 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 UBR5O95071 2799 aaPredicted RBP17.95■□□□□ 0.46
SNTA1-201ENST00000217381 FBN2P35556 2912 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 TRBV6-5A0A0K0K1A5 114 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 TRBV27A0A0K0K1C4 114 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 RIPPLY3P57055 190 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 PMVKQ15126 192 aa17.95■□□□□ 0.46
SNTA1-201ENST00000217381 COTL1Q14019 142 aa17.94■□□□□ 0.46
SNTA1-201ENST00000217381 RRN3P1Q2M238 152 aa17.94■□□□□ 0.46
SNTA1-201ENST00000217381 FAM74A4Q5TZK3 123 aa17.94■□□□□ 0.46
SNTA1-201ENST00000217381 TMEM141Q96I45 108 aa17.94■□□□□ 0.46
SNTA1-201ENST00000217381 TIMM17AQ99595 171 aa17.94■□□□□ 0.46
SNTA1-201ENST00000217381 Q8N1Y9 231 aa17.94■□□□□ 0.46
SNTA1-201ENST00000217381 SCGB2A2Q13296 93 aa17.93■□□□□ 0.46
SNTA1-201ENST00000217381 CD300EQ496F6 205 aaPredicted RBP17.93■□□□□ 0.46
SNTA1-201ENST00000217381 PAPPA-AS1Q5QFB9 102 aa17.93■□□□□ 0.46
SNTA1-201ENST00000217381 PLEKHB2Q96CS7 222 aa17.93■□□□□ 0.46
SNTA1-201ENST00000217381 EMP1P54849 157 aa17.93■□□□□ 0.46
SNTA1-201ENST00000217381 MORN3Q6PF18 240 aaPredicted RBP17.92■□□□□ 0.46
SNTA1-201ENST00000217381 MAPK1IP1LQ8NDC0 245 aa17.92■□□□□ 0.46
SNTA1-201ENST00000217381 SYT8Q8NBV8 401 aa17.92■□□□□ 0.46
SNTA1-201ENST00000217381 IGHV1OR15-1A0A075B7D0 117 aa17.91■□□□□ 0.46
SNTA1-201ENST00000217381 SYNJ2BPP57105 145 aa17.91■□□□□ 0.46
SNTA1-201ENST00000217381 SCGB1D4Q6XE38 83 aa17.91■□□□□ 0.46
SNTA1-201ENST00000217381 KLHL30-AS1Q8NEE0 82 aa17.91■□□□□ 0.46
SNTA1-201ENST00000217381 M0QY20 66 aa17.9■□□□□ 0.46
SNTA1-201ENST00000217381 SPINK13Q1W4C9 94 aa17.9■□□□□ 0.46
SNTA1-201ENST00000217381 CENPEQ02224 2701 aa17.9■□□□□ 0.46
SNTA1-201ENST00000217381 TEX48A0A1B0GUV7 120 aa17.9■□□□□ 0.46
SNTA1-201ENST00000217381 ZANQ9Y493 2812 aa17.89■□□□□ 0.46
SNTA1-201ENST00000217381 HERVK_113P61574 105 aa17.89■□□□□ 0.46
SNTA1-201ENST00000217381 RPL24P83731 157 aaKnown RBP17.89■□□□□ 0.46
SNTA1-201ENST00000217381 ZNF56Q15929 161 aa17.89■□□□□ 0.46
SNTA1-201ENST00000217381 F8W1H4 67 aa17.89■□□□□ 0.45
SNTA1-201ENST00000217381 H3BMG7 143 aa17.89■□□□□ 0.45
SNTA1-201ENST00000217381 HOXA3O43365 443 aaPredicted RBP17.88■□□□□ 0.45
SNTA1-201ENST00000217381 ZNF256Q9Y2P7 627 aaPredicted RBP17.88■□□□□ 0.45
SNTA1-201ENST00000217381 J3QLI3 93 aa17.88■□□□□ 0.45
SNTA1-201ENST00000217381 ZNF876PQ49A33 203 aa17.88■□□□□ 0.45
SNTA1-201ENST00000217381 TGFAP01135 160 aa17.87■□□□□ 0.45
SNTA1-201ENST00000217381 AMTNQ6UX39 209 aa17.87■□□□□ 0.45
SNTA1-201ENST00000217381 ZNRF2Q8NHG8 242 aa17.87■□□□□ 0.45
SNTA1-201ENST00000217381 WFDC2Q14508 124 aa17.86■□□□□ 0.45
SNTA1-201ENST00000217381 DUX5Q96PT3 197 aa17.86■□□□□ 0.45
SNTA1-201ENST00000217381 NSUN5P1Q3KNT7 163 aa17.86■□□□□ 0.45
SNTA1-201ENST00000217381 TRPT1Q86TN4 253 aaKnown RBP17.86■□□□□ 0.45
SNTA1-201ENST00000217381 VPREB3Q9UKI3 123 aa17.86■□□□□ 0.45
SNTA1-201ENST00000217381 ANKRD17O75179 2603 aaKnown RBP17.85■□□□□ 0.45
SNTA1-201ENST00000217381 TMEM238LA0A1B0GVL6 79 aa17.85■□□□□ 0.45
SNTA1-201ENST00000217381 A6NJY4 79 aa17.85■□□□□ 0.45
SNTA1-201ENST00000217381 FSHBP01225 129 aa17.85■□□□□ 0.45
SNTA1-201ENST00000217381 HOXD3P31249 432 aaPredicted RBP17.85■□□□□ 0.45
SNTA1-201ENST00000217381 SRSF9Q13242 221 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNTA1-201ENST00000217381 A0A0J9YY99 117 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 ELANEP08246 267 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 UBE2D1P51668 147 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 TSPEAR-AS2P59090 65 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 RHOHQ15669 191 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 RNF152Q8N8N0 203 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 PGPEP1Q9NXJ5 209 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 SPANXB1Q9NS25 103 aaPredicted RBP17.84■□□□□ 0.45
SNTA1-201ENST00000217381 TENM4Q6N022 2769 aa17.84■□□□□ 0.45
SNTA1-201ENST00000217381 TMEM170BQ5T4T1 132 aa17.83■□□□□ 0.45
SNTA1-201ENST00000217381 ZNF702PQ9H963 129 aa17.83■□□□□ 0.45
SNTA1-201ENST00000217381 USP9YO00507 2555 aaPredicted RBP17.82■□□□□ 0.44
SNTA1-201ENST00000217381 UBE2E2Q96LR5 201 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms