RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PAX4O43316 350 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
UPK3A-201ENST00000216211 RPS10P46783 165 aaKnown RBP10.3□□□□□ -0.76
UPK3A-201ENST00000216211 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 COX8CQ7Z4L0 72 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 NUDT10Q8NFP7 164 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 NUDT11Q96G61 164 aa10.3□□□□□ -0.76
UPK3A-201ENST00000216211 BTF3P20290 206 aaKnown RBP10.29□□□□□ -0.76
UPK3A-201ENST00000216211 ZNF138P52744 262 aa10.29□□□□□ -0.76
UPK3A-201ENST00000216211 LINC00315P59091 139 aa10.29□□□□□ -0.76
UPK3A-201ENST00000216211 ICOSQ9Y6W8 199 aa10.29□□□□□ -0.76
UPK3A-201ENST00000216211 SMIM27A0A1W2PRY6 76 aa10.28□□□□□ -0.76
UPK3A-201ENST00000216211 SIVA1O15304 175 aa10.28□□□□□ -0.76
UPK3A-201ENST00000216211 RAB5BP61020 215 aa10.28□□□□□ -0.76
UPK3A-201ENST00000216211 SAPCD1Q5SSQ6 148 aa10.28□□□□□ -0.76
UPK3A-201ENST00000216211 NXPH4O95158 308 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 CRYBA4P53673 196 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 FHL2Q14192 279 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 CT83Q5H943 113 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 MUC21Q5SSG8 566 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 C8orf49Q96NF6 230 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 PRO0255Q9UI72 69 aa10.27□□□□□ -0.77
UPK3A-201ENST00000216211 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
UPK3A-201ENST00000216211 LOC105371267A0A1B0GV96 52 aa10.26□□□□□ -0.77
UPK3A-201ENST00000216211 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
UPK3A-201ENST00000216211 DAZAP1Q96EP5 407 aaKnown RBP10.26□□□□□ -0.77
UPK3A-201ENST00000216211 ZC2HC1AQ96GY0 325 aa10.26□□□□□ -0.77
UPK3A-201ENST00000216211 RPP21Q9H633 154 aaKnown RBP10.26□□□□□ -0.77
UPK3A-201ENST00000216211 MDFICQ9P1T7 246 aa10.26□□□□□ -0.77
UPK3A-201ENST00000216211 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
UPK3A-201ENST00000216211 P01737 135 aa10.25□□□□□ -0.77
UPK3A-201ENST00000216211 RPL19P84098 196 aaKnown RBP10.25□□□□□ -0.77
UPK3A-201ENST00000216211 SLAQ13239 276 aa10.25□□□□□ -0.77
UPK3A-201ENST00000216211 LYPD5Q6UWN5 251 aa10.25□□□□□ -0.77
UPK3A-201ENST00000216211 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
UPK3A-201ENST00000216211 TRGV4A0A0C4DH28 118 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 A8MWL6 223 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 PHOX2AO14813 284 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 TRGC2P03986 189 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 CRIP1P50238 77 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
UPK3A-201ENST00000216211 Q8N1X5 172 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 TNFRSF18Q9Y5U5 241 aa10.24□□□□□ -0.77
UPK3A-201ENST00000216211 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 COX19Q49B96 90 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 Q6AWC8 147 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 ZFP82Q8N141 532 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 SCRT2Q9NQ03 307 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 NAT8BQ9UHF3 227 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
UPK3A-201ENST00000216211 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
UPK3A-201ENST00000216211 SMUG1Q53HV7 270 aa10.22□□□□□ -0.77
UPK3A-201ENST00000216211 FAM162BQ5T6X4 162 aa10.22□□□□□ -0.77
UPK3A-201ENST00000216211 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
UPK3A-201ENST00000216211 NEGR1Q7Z3B1 354 aa10.22□□□□□ -0.77
UPK3A-201ENST00000216211 TRGV11A0A075B6L2 103 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 K7EQD1 137 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 FOXA3P55318 350 aaPredicted RBP10.21□□□□□ -0.77
UPK3A-201ENST00000216211 RASL11AQ6T310 242 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 NUP35Q8NFH5 326 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 SPXQ9BT56 116 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 NAGKQ9UJ70 344 aa10.21□□□□□ -0.77
UPK3A-201ENST00000216211 SH2D1AO60880 128 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 GYPEP15421 78 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 SRIP30626 198 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 RASL10AQ92737 203 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 FRZBQ92765 325 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 GNB1LQ9BYB4 327 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 TRAPPC1Q9Y5R8 145 aa10.2□□□□□ -0.78
UPK3A-201ENST00000216211 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 HIGD1CA8MV81 97 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 GNRH2O43555 120 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 TRGC1P0CF51 173 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 ZNF80P51504 273 aaPredicted RBP10.19□□□□□ -0.78
UPK3A-201ENST00000216211 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 WFDC10BQ8IUB3 73 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 VPS13BQ7Z7G8 4022 aa10.19□□□□□ -0.78
UPK3A-201ENST00000216211 EREGO14944 169 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BKO60814 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 MT-ND6P03923 174 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 S100A6P06703 90 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BJP06899 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 DNAH10OSP0CZ25 163 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BOP23527 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BBP33778 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BDP58876 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 RPS20P60866 119 aaKnown RBP10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BCP62807 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 FABP9Q0Z7S8 132 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST2H2BEQ16778 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 TDRG1Q3Y452 100 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms