RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
POLR2E-201ENST00000215587 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
POLR2E-201ENST00000215587 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
POLR2E-201ENST00000215587 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
POLR2E-201ENST00000215587 MRPL18Q9H0U6 180 aaKnown RBP11.86□□□□□ -0.51
POLR2E-201ENST00000215587 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
POLR2E-201ENST00000215587 JPT2Q9H910 190 aa11.86□□□□□ -0.51
POLR2E-201ENST00000215587 TRGV2A0A075B6R0 118 aa11.85□□□□□ -0.51
POLR2E-201ENST00000215587 MGPP08493 103 aa11.85□□□□□ -0.51
POLR2E-201ENST00000215587 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
POLR2E-201ENST00000215587 FAM104BQ5XKR9 115 aa11.85□□□□□ -0.51
POLR2E-201ENST00000215587 A0A087WWL8 130 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 RHODO00212 210 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 RS1O15537 224 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 SPART-AS1P0CW21 52 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 FABP9Q0Z7S8 132 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 FAM74A4Q5TZK3 123 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 AMN1Q8IY45 258 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 DKK2Q9UBU2 259 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 MUC4Q99102 2169 aa11.84□□□□□ -0.51
POLR2E-201ENST00000215587 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
POLR2E-201ENST00000215587 DEFB130BP0DP73 79 aa11.83□□□□□ -0.52
POLR2E-201ENST00000215587 DEFB130AP0DP74 79 aa11.83□□□□□ -0.52
POLR2E-201ENST00000215587 SLAQ13239 276 aa11.83□□□□□ -0.52
POLR2E-201ENST00000215587 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
POLR2E-201ENST00000215587 OR4C5Q8NGB2 326 aa11.83□□□□□ -0.52
POLR2E-201ENST00000215587 TRGC2P03986 189 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 CRYGDP07320 174 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 DAD1P61803 113 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 ZNF56Q15929 161 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 LINC00612Q8N6U2 182 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 SAMD10Q9BYL1 202 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
POLR2E-201ENST00000215587 F5H697 171 aa11.81□□□□□ -0.52
POLR2E-201ENST00000215587 CIDEAO60543 219 aa11.81□□□□□ -0.52
POLR2E-201ENST00000215587 RAB4AP20338 218 aa11.81□□□□□ -0.52
POLR2E-201ENST00000215587 MRPL51Q4U2R6 128 aaKnown RBP11.81□□□□□ -0.52
POLR2E-201ENST00000215587 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
POLR2E-201ENST00000215587 RNF185Q96GF1 192 aa11.81□□□□□ -0.52
POLR2E-201ENST00000215587 A0A0J9YWU9 116 aa11.8□□□□□ -0.52
POLR2E-201ENST00000215587 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
POLR2E-201ENST00000215587 NHLRC4P0CG21 123 aaPredicted RBP11.8□□□□□ -0.52
POLR2E-201ENST00000215587 MRAP2Q96G30 205 aa11.8□□□□□ -0.52
POLR2E-201ENST00000215587 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
POLR2E-201ENST00000215587 CELA1Q9UNI1 258 aa11.8□□□□□ -0.52
POLR2E-201ENST00000215587 COL7A1Q02388 2944 aa11.8□□□□□ -0.52
POLR2E-201ENST00000215587 IGHV3-73A0A0B4J1V6 119 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 PPBPP02775 128 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 CKS2P33552 79 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 LINC00315P59091 139 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 KIAA1644Q3SXP7 199 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 UFSP1Q6NVU6 142 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 POM121L12Q8N7R1 296 aa11.79□□□□□ -0.52
POLR2E-201ENST00000215587 ORMDL3Q8N138 153 aa11.78□□□□□ -0.52
POLR2E-201ENST00000215587 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
POLR2E-201ENST00000215587 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
POLR2E-201ENST00000215587 D6R8Y8 96 aa11.77□□□□□ -0.53
POLR2E-201ENST00000215587 H7C1H1 209 aa11.77□□□□□ -0.53
POLR2E-201ENST00000215587 NCR2O95944 276 aa11.77□□□□□ -0.53
POLR2E-201ENST00000215587 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
POLR2E-201ENST00000215587 U3KQK5 164 aa11.77□□□□□ -0.53
POLR2E-201ENST00000215587 TRGV4A0A0C4DH28 118 aa11.76□□□□□ -0.53
POLR2E-201ENST00000215587 SMKR1H3BMG3 65 aa11.76□□□□□ -0.53
POLR2E-201ENST00000215587 ATP5G1P05496 136 aa11.76□□□□□ -0.53
POLR2E-201ENST00000215587 SRIP30626 198 aa11.76□□□□□ -0.53
POLR2E-201ENST00000215587 RAB5BP61020 215 aa11.76□□□□□ -0.53
POLR2E-201ENST00000215587 PRELID3AQ96N28 172 aa11.76□□□□□ -0.53
POLR2E-201ENST00000215587 PHOX2AO14813 284 aa11.75□□□□□ -0.53
POLR2E-201ENST00000215587 PPP1R17O96001 155 aa11.75□□□□□ -0.53
POLR2E-201ENST00000215587 ALKBH7Q9BT30 221 aaPredicted RBP11.75□□□□□ -0.53
POLR2E-201ENST00000215587 LAMTOR2Q9Y2Q5 125 aa11.75□□□□□ -0.53
POLR2E-201ENST00000215587 C11orf45Q8TAV5 145 aa11.74□□□□□ -0.53
POLR2E-201ENST00000215587 GATA1P15976 413 aaPredicted RBP11.73□□□□□ -0.53
POLR2E-201ENST00000215587 C12orf74Q32Q52 190 aa11.73□□□□□ -0.53
POLR2E-201ENST00000215587 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
POLR2E-201ENST00000215587 EDA2RQ9HAV5 297 aa11.73□□□□□ -0.53
POLR2E-201ENST00000215587 K7EQD1 137 aa11.72□□□□□ -0.53
POLR2E-201ENST00000215587 M0QY20 66 aa11.72□□□□□ -0.53
POLR2E-201ENST00000215587 TNFRSF6BO95407 300 aa11.72□□□□□ -0.53
POLR2E-201ENST00000215587 NPYP01303 97 aa11.72□□□□□ -0.53
POLR2E-201ENST00000215587 HTN3P15516 51 aa11.72□□□□□ -0.53
POLR2E-201ENST00000215587 FHL2Q14192 279 aa11.72□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BKO60814 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 GAS8-AS1O95177 125 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BJP06899 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BOP23527 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BBP33778 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BDP58876 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BCP62807 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.53
POLR2E-201ENST00000215587 Q6ZSN1 163 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 NRACQ8N912 160 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.53
POLR2E-201ENST00000215587 TRBV6-4A0A1B0GX49 114 aa11.7□□□□□ -0.54
POLR2E-201ENST00000215587 F5H768 121 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms