RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 INSP01308 110 aa13.59□□□□□ -0.23
CTSA-201ENST00000191018 FCER1GP30273 86 aa13.59□□□□□ -0.23
CTSA-201ENST00000191018 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
CTSA-201ENST00000191018 RPL39LQ96EH5 51 aaKnown RBP13.59□□□□□ -0.23
CTSA-201ENST00000191018 SMIM2Q9BVW6 85 aa13.59□□□□□ -0.23
CTSA-201ENST00000191018 C19orf73Q9NVV2 129 aa13.59□□□□□ -0.23
CTSA-201ENST00000191018 NIPBLQ6KC79 2804 aaeCLIP13.58□□□□□ -0.24
CTSA-201ENST00000191018 PPP1R17O96001 155 aa13.58□□□□□ -0.24
CTSA-201ENST00000191018 PF4P02776 101 aa13.58□□□□□ -0.24
CTSA-201ENST00000191018 CRYGDP07320 174 aa13.57□□□□□ -0.24
CTSA-201ENST00000191018 LINC01545Q5VT33 79 aa13.57□□□□□ -0.24
CTSA-201ENST00000191018 ATOH7Q8N100 152 aa13.57□□□□□ -0.24
CTSA-201ENST00000191018 A0A087WWL8 130 aa13.57□□□□□ -0.24
CTSA-201ENST00000191018 C20orf202A1L168 122 aa13.57□□□□□ -0.24
CTSA-201ENST00000191018 ZNF876PQ49A33 203 aa13.57□□□□□ -0.24
CTSA-201ENST00000191018 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
CTSA-201ENST00000191018 PRM2P04554 102 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 HTN1P15515 57 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 LAGE3Q14657 143 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 SPATA45Q537H7 98 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.55□□□□□ -0.24
CTSA-201ENST00000191018 LINC01587Q99440 93 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 XCL2Q9UBD3 114 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 TRAV9-2A0A087WT02 112 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 TCAPO15273 167 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 TMEM158Q8WZ71 300 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 PTH2Q96A98 100 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 IFI27L1Q96BM0 104 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 NDUFAF3Q9BU61 184 aa13.55□□□□□ -0.24
CTSA-201ENST00000191018 K7EMI3 77 aa13.54□□□□□ -0.24
CTSA-201ENST00000191018 NUTF2P61970 127 aaKnown RBP13.54□□□□□ -0.24
CTSA-201ENST00000191018 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
CTSA-201ENST00000191018 ZNF415Q09FC8 603 aa13.54□□□□□ -0.24
CTSA-201ENST00000191018 MAJINQ3KP22 176 aa13.54□□□□□ -0.24
CTSA-201ENST00000191018 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
CTSA-201ENST00000191018 ZNF705AQ6ZN79 300 aaPredicted RBP13.53□□□□□ -0.24
CTSA-201ENST00000191018 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 H0Y8G0 127 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 M0R2P5 195 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 DEFA6Q01524 100 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 C14orf144Q96I85 54 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 CITED1Q99966 193 aa13.53□□□□□ -0.24
CTSA-201ENST00000191018 MIEN1Q9BRT3 115 aa13.52□□□□□ -0.25
CTSA-201ENST00000191018 WFDC10AQ9H1F0 79 aa13.52□□□□□ -0.25
CTSA-201ENST00000191018 TRBV6-5A0A0K0K1A5 114 aa13.51□□□□□ -0.25
CTSA-201ENST00000191018 F5H697 171 aa13.51□□□□□ -0.25
CTSA-201ENST00000191018 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
CTSA-201ENST00000191018 LGALS9CQ6DKI2 356 aa13.51□□□□□ -0.25
CTSA-201ENST00000191018 M0QY20 66 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 GIG44P09565 113 aaPredicted RBP13.5□□□□□ -0.25
CTSA-201ENST00000191018 IGLL1P15814 213 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 POLR2KP53803 58 aaKnown RBP13.5□□□□□ -0.25
CTSA-201ENST00000191018 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 ZNF56Q15929 161 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 C18orf15Q96N68 181 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 SPXQ9BT56 116 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 CSTL1Q9H114 145 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 ST20Q9HBF5 79 aa13.5□□□□□ -0.25
CTSA-201ENST00000191018 F8P00451 2351 aa13.49□□□□□ -0.25
CTSA-201ENST00000191018 IGLC3P0DOY3 106 aa13.49□□□□□ -0.25
CTSA-201ENST00000191018 INSL3P51460 131 aa13.49□□□□□ -0.25
CTSA-201ENST00000191018 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
CTSA-201ENST00000191018 PMCHL2Q9BQD1 86 aa13.49□□□□□ -0.25
CTSA-201ENST00000191018 FLNBO75369 2602 aaKnown RBP13.49□□□□□ -0.25
CTSA-201ENST00000191018 NACAE9PAV3 2078 aa13.49□□□□□ -0.25
CTSA-201ENST00000191018 A8MWV9 139 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 UFSP1Q6NVU6 142 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 TMEM208Q9BTX3 173 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 NUDT3O95989 172 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 AZU1P20160 251 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 SPATA3Q8NHX4 192 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 IL17DQ8TAD2 202 aa13.48□□□□□ -0.25
CTSA-201ENST00000191018 hDV102S1A0JD36 115 aa13.46□□□□□ -0.25
CTSA-201ENST00000191018 ATP5LO75964 103 aa13.46□□□□□ -0.25
CTSA-201ENST00000191018 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
CTSA-201ENST00000191018 TENM1Q9UKZ4 2725 aa13.46□□□□□ -0.25
CTSA-201ENST00000191018 JMJD1CQ15652 2540 aa13.46□□□□□ -0.25
CTSA-201ENST00000191018 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.26
CTSA-201ENST00000191018 SDHAF1A6NFY7 115 aa13.46□□□□□ -0.26
CTSA-201ENST00000191018 VCYO14598 125 aa13.46□□□□□ -0.26
CTSA-201ENST00000191018 C9orf66Q5T8R8 295 aa13.46□□□□□ -0.26
CTSA-201ENST00000191018 TOMM6Q96B49 74 aa13.46□□□□□ -0.26
CTSA-201ENST00000191018 UQCR10Q9UDW1 63 aa13.45□□□□□ -0.26
CTSA-201ENST00000191018 GOLT1BQ9Y3E0 138 aa13.45□□□□□ -0.26
CTSA-201ENST00000191018 IGHV3OR16-12A0A075B7B8 117 aa13.44□□□□□ -0.26
CTSA-201ENST00000191018 RPL35AP18077 110 aaKnown RBP13.44□□□□□ -0.26
CTSA-201ENST00000191018 CFAP126Q5VTH2 177 aa13.44□□□□□ -0.26
CTSA-201ENST00000191018 NEGR1Q7Z3B1 354 aa13.44□□□□□ -0.26
CTSA-201ENST00000191018 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
CTSA-201ENST00000191018 C1QTNF4Q9BXJ3 329 aa13.44□□□□□ -0.26
CTSA-201ENST00000191018 ODF1Q14990 250 aa13.44□□□□□ -0.26
CTSA-201ENST00000191018 HSBP1L1C9JCN9 74 aa13.43□□□□□ -0.26
CTSA-201ENST00000191018 TMEM263Q8WUH6 116 aaKnown RBP13.43□□□□□ -0.26
CTSA-201ENST00000191018 MRPL16Q9NX20 251 aaKnown RBP13.43□□□□□ -0.26
CTSA-201ENST00000191018 VWFP04275 2813 aa13.43□□□□□ -0.26
CTSA-201ENST00000191018 H7C1H1 209 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms