RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.74
PHGDH-233ENST00000642021 LCNL1Q6ZST4 164 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 OR11H1Q8NG94 326 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 OR11H2Q8NH07 326 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 LINC00477Q96M19 166 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 YAE1D1Q9NRH1 226 aa10.46□□□□□ -0.74
PHGDH-233ENST00000642021 FAM223BA6NKX1 122 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 FAM223AQ8IWN6 122 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 SMIM20Q8N5G0 67 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 F8VRH5 84 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 S100A4P26447 101 aaKnown RBP10.45□□□□□ -0.74
PHGDH-233ENST00000642021 LY6DQ14210 128 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 MTURNQ8N3F0 131 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 SCGB3A1Q96QR1 104 aa10.45□□□□□ -0.74
PHGDH-233ENST00000642021 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
PHGDH-233ENST00000642021 UCNP55089 124 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 RPL11P62913 178 aaKnown RBP10.44□□□□□ -0.74
PHGDH-233ENST00000642021 LY6EQ16553 131 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 IGLL5B9A064 214 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 H7C1H1 209 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 PLNP26678 52 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 Q6ZS46 218 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 OR10J6PQ8NGY7 276 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 TOMM6Q96B49 74 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 PHLDA3Q9Y5J5 127 aa10.44□□□□□ -0.74
PHGDH-233ENST00000642021 IGHV4-39P01824 125 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 NEXN-AS1Q8NBZ9 246 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 ITPR1Q14643 2758 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 TRAV12-1A0A0B4J245 112 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 E9PLD3 99 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 NDUFA4O00483 81 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 MGPP08493 103 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
PHGDH-233ENST00000642021 CRIP2P52943 208 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-233ENST00000642021 C12orf74Q32Q52 190 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 CELSR2Q9HCU4 2923 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 IGHV1-69DA0A0B4J2H0 117 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 EDN2P20800 178 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 ASIPP42127 132 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 ORMDL2Q53FV1 153 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
PHGDH-233ENST00000642021 GAGE12HA6NDE8 117 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 OVOL1O14753 267 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 IGHV4-38-2P0DP08 117 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 SRD5A1P18405 259 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 BLCAPP62952 87 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 C2orf66Q6UXQ4 117 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 HIST1H4GQ99525 98 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 TEX48A0A1B0GUV7 120 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
PHGDH-233ENST00000642021 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 C20orf78Q9BR46 151 aa10.42□□□□□ -0.74
PHGDH-233ENST00000642021 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-233ENST00000642021 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
PHGDH-233ENST00000642021 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
PHGDH-233ENST00000642021 IGHV4-61A0A0C4DH41 118 aa10.41□□□□□ -0.74
PHGDH-233ENST00000642021 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 CD300EQ496F6 205 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-233ENST00000642021 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 JPT2Q9H910 190 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 MUC4Q99102 2169 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 MYMXA0A1B0GTQ4 84 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 WFDC2Q14508 124 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 TAL2Q16559 108 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 CYSLTR1Q9Y271 337 aa10.4□□□□□ -0.74
PHGDH-233ENST00000642021 H3BMG7 143 aa10.39□□□□□ -0.75
PHGDH-233ENST00000642021 LINC00315P59091 139 aa10.39□□□□□ -0.75
PHGDH-233ENST00000642021 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
PHGDH-233ENST00000642021 SLC25A16P16260 332 aa10.39□□□□□ -0.75
PHGDH-233ENST00000642021 APRG1Q8IVJ8 170 aa10.39□□□□□ -0.75
PHGDH-233ENST00000642021 H3BUX3 64 aa10.38□□□□□ -0.75
PHGDH-233ENST00000642021 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
PHGDH-233ENST00000642021 IGHG2P01859 326 aa10.38□□□□□ -0.75
PHGDH-233ENST00000642021 LGALS1P09382 135 aaKnown RBP10.38□□□□□ -0.75
PHGDH-233ENST00000642021 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
PHGDH-233ENST00000642021 CRYGDP07320 174 aa10.38□□□□□ -0.75
PHGDH-233ENST00000642021 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
PHGDH-233ENST00000642021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.38□□□□□ -0.759e-8■□□□□ 11
PHGDH-233ENST00000642021 TSHBP01222 138 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 RNF183Q96D59 192 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 USMG5Q96IX5 58 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 CSMD2Q7Z408 3487 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 EMP1P54849 157 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 KLHL30-AS1Q8NEE0 82 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
PHGDH-233ENST00000642021 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
PHGDH-233ENST00000642021 SH2D6Q7Z4S9 175 aa10.36□□□□□ -0.75
PHGDH-233ENST00000642021 A6NDX4 124 aa10.36□□□□□ -0.75
PHGDH-233ENST00000642021 B5MCH6 92 aa10.36□□□□□ -0.75
PHGDH-233ENST00000642021 RRN3P1Q2M238 152 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms