RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 MYO9AB2RTY4 2548 aa13.32□□□□□ -0.28
PHGDH-226ENST00000641756 C7orf71A4D174 169 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 LINC01546A6NGU7 62 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 MED14OSP0DP75 135 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 KRTAP1-1Q07627 177 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 C4orf3Q8WVX3 66 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 DPF1Q92782 380 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 C18orf15Q96N68 181 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 ESM1Q9NQ30 184 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 IGLV2-18A0A075B6J9 118 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 Q8N8P6 123 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 KLHL30-AS1Q8NEE0 82 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 OR1N2Q8NGR9 330 aa13.31□□□□□ -0.28
PHGDH-226ENST00000641756 HSBP1L1C9JCN9 74 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 TSPOP30536 169 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 SPINK13Q1W4C9 94 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 IFI27L1Q96BM0 104 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 YAE1D1Q9NRH1 226 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 CUBNO60494 3623 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 SORL1Q92673 2214 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 MGPP08493 103 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 CD7P09564 240 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 MRPL52Q86TS9 123 aaKnown RBP13.3□□□□□ -0.28
PHGDH-226ENST00000641756 MRAP2Q96G30 205 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 DPH3P1Q9H4G8 78 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
PHGDH-226ENST00000641756 FCER1GP30273 86 aa13.29□□□□□ -0.28
PHGDH-226ENST00000641756 C11orf44Q8N8P7 122 aa13.29□□□□□ -0.28
PHGDH-226ENST00000641756 TMEM158Q8WZ71 300 aa13.29□□□□□ -0.28
PHGDH-226ENST00000641756 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-226ENST00000641756 ODF3Q96PU9 254 aa13.29□□□□□ -0.28
PHGDH-226ENST00000641756 MUC4Q99102 2169 aa13.29□□□□□ -0.28
PHGDH-226ENST00000641756 TCAPO15273 167 aa13.28□□□□□ -0.28
PHGDH-226ENST00000641756 OR9G4Q8NGQ1 327 aa13.28□□□□□ -0.28
PHGDH-226ENST00000641756 GOLT1BQ9Y3E0 138 aa13.28□□□□□ -0.28
PHGDH-226ENST00000641756 KNCNA6PVL3 124 aa13.27□□□□□ -0.28
PHGDH-226ENST00000641756 CDKN1BP46527 198 aa13.27□□□□□ -0.28
PHGDH-226ENST00000641756 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.28
PHGDH-226ENST00000641756 FOXI2Q6ZQN5 318 aa13.27□□□□□ -0.28
PHGDH-226ENST00000641756 RPL39LQ96EH5 51 aaKnown RBP13.27□□□□□ -0.28
PHGDH-226ENST00000641756 AP1S3Q96PC3 154 aa13.27□□□□□ -0.28
PHGDH-226ENST00000641756 PEMTQ9UBM1 199 aa13.27□□□□□ -0.28
PHGDH-226ENST00000641756 HELZ2Q9BYK8 2649 aaKnown RBP13.27□□□□□ -0.28
PHGDH-226ENST00000641756 PRSS47A8MTI9 375 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 CD5LO43866 347 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 LGALS9BQ3B8N2 356 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 LGALS9CQ6DKI2 356 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 LINC00469Q8N7U9 141 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 RASL10AQ92737 203 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 JPT2Q9H910 190 aa13.27□□□□□ -0.29
PHGDH-226ENST00000641756 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
PHGDH-226ENST00000641756 DEFB131AP59861 70 aa13.26□□□□□ -0.29
PHGDH-226ENST00000641756 A0A1W2PRX2 142 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 ZNF124Q15973 351 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 TMEM61Q8N0U2 210 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 NXPH4O95158 308 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 LAGE3Q14657 143 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 DEFB125Q8N687 156 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 FOXC2Q99958 501 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 MDFICQ9P1T7 246 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 ACANP16112 2415 aa13.25□□□□□ -0.29
PHGDH-226ENST00000641756 AMTNQ6UX39 209 aa13.24□□□□□ -0.29
PHGDH-226ENST00000641756 SMIM2Q9BVW6 85 aa13.24□□□□□ -0.29
PHGDH-226ENST00000641756 MRPS16Q9Y3D3 137 aaKnown RBP13.24□□□□□ -0.29
PHGDH-226ENST00000641756 ITPR2Q14571 2701 aa13.24□□□□□ -0.29
PHGDH-226ENST00000641756 DYNLRB2Q8TF09 96 aa13.24□□□□□ -0.29
PHGDH-226ENST00000641756 DKK2Q9UBU2 259 aa13.24□□□□□ -0.29
PHGDH-226ENST00000641756 IGHV3-16A0A0C4DH30 117 aa13.23□□□□□ -0.29
PHGDH-226ENST00000641756 SMIM17P0DL12 118 aa13.23□□□□□ -0.29
PHGDH-226ENST00000641756 HINT1P49773 126 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-226ENST00000641756 TCTAP57738 103 aa13.23□□□□□ -0.29
PHGDH-226ENST00000641756 SUMO2P61956 95 aaKnown RBP13.23□□□□□ -0.29
PHGDH-226ENST00000641756 Q8N1Y9 231 aa13.23□□□□□ -0.29
PHGDH-226ENST00000641756 ANK3Q12955 4377 aaKnown RBP13.23□□□□□ -0.29
PHGDH-226ENST00000641756 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 SLC25A34Q6PIV7 304 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 A0A087WWL8 130 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 CD28P10747 220 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 LINC00315P59091 139 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 ANKRD39Q53RE8 183 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 STPG4Q8N801 248 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 RAX2Q96IS3 184 aa13.22□□□□□ -0.29
PHGDH-226ENST00000641756 PRSS1P07477 247 aa13.21□□□□□ -0.29
PHGDH-226ENST00000641756 C9orf85Q96MD7 179 aa13.21□□□□□ -0.29
PHGDH-226ENST00000641756 NUDT3O95989 172 aa13.2□□□□□ -0.3
PHGDH-226ENST00000641756 RBMY1A1P0DJD3 496 aaKnown RBP13.2□□□□□ -0.3
PHGDH-226ENST00000641756 RBMY1CP0DJD4 496 aa13.2□□□□□ -0.3
PHGDH-226ENST00000641756 RBMY1FQ15415 496 aaKnown RBP13.2□□□□□ -0.3
PHGDH-226ENST00000641756 DEFB114Q30KQ6 69 aa13.2□□□□□ -0.3
PHGDH-226ENST00000641756 CD300EQ496F6 205 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-226ENST00000641756 C20orf78Q9BR46 151 aa13.2□□□□□ -0.3
PHGDH-226ENST00000641756 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
PHGDH-226ENST00000641756 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
PHGDH-226ENST00000641756 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
PHGDH-226ENST00000641756 HLA-DRB4P13762 266 aa13.19□□□□□ -0.3
PHGDH-226ENST00000641756 POM121L12Q8N7R1 296 aa13.19□□□□□ -0.3
PHGDH-226ENST00000641756 HLA-DRB4X5D2U9 266 aa13.19□□□□□ -0.3
PHGDH-226ENST00000641756 NF1P21359 2839 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms