RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TRAV21A0A0B4J279 112 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 GAGE10A6NGK3 116 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 C9orf118A6NHY6 69 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 IGHV4-59P01825 116 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
PHGDH-223ENST00000641597 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.39
PHGDH-223ENST00000641597 SAP30O75446 220 aa12.64□□□□□ -0.39
PHGDH-223ENST00000641597 ASIPP42127 132 aa12.64□□□□□ -0.39
PHGDH-223ENST00000641597 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
PHGDH-223ENST00000641597 SRSF1Q07955 248 aaKnown RBP eCLIP12.64□□□□□ -0.392e-10■■■□□ 18.2
PHGDH-223ENST00000641597 A6NDN8 102 aa12.64□□□□□ -0.39
PHGDH-223ENST00000641597 ZNF469Q96JG9 3925 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-223ENST00000641597 NF1P21359 2839 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 H3BRM9 83 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 OVOL1O14753 267 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 IGLV1-40P01703 118 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 A0A087WWL8 130 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 USMG5Q96IX5 58 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 DAZ1Q9NQZ3 744 aaKnown RBP12.63□□□□□ -0.39
PHGDH-223ENST00000641597 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
PHGDH-223ENST00000641597 TRAV12-3A0A0B4J271 114 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 ATP5LO75964 103 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
PHGDH-223ENST00000641597 A0A087WX48 190 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 SIVA1O15304 175 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 EMP1P54849 157 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 HIST2H2BDQ6DRA6 164 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 UFSP1Q6NVU6 142 aa12.62□□□□□ -0.39
PHGDH-223ENST00000641597 SETD2Q9BYW2 2564 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-223ENST00000641597 EPG5Q9HCE0 2579 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 DPH3P1Q9H4G8 78 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 SMPXQ9UHP9 88 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 NAV2Q8IVL1 2488 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 PRSS47A8MTI9 375 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-223ENST00000641597 DEFB112Q30KQ8 113 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 LENEPQ9Y5L5 61 aa12.61□□□□□ -0.39
PHGDH-223ENST00000641597 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
PHGDH-223ENST00000641597 CFHR3Q02985 330 aa12.6□□□□□ -0.39
PHGDH-223ENST00000641597 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
PHGDH-223ENST00000641597 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
PHGDH-223ENST00000641597 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
PHGDH-223ENST00000641597 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
PHGDH-223ENST00000641597 ATP6V0BQ99437 205 aa12.59□□□□□ -0.39
PHGDH-223ENST00000641597 PRB1P04280 392 aa12.58□□□□□ -0.4
PHGDH-223ENST00000641597 CDKN1BP46527 198 aa12.58□□□□□ -0.4
PHGDH-223ENST00000641597 LINC00315P59091 139 aa12.58□□□□□ -0.4
PHGDH-223ENST00000641597 A0A1W2PPM0 123 aa12.58□□□□□ -0.4
PHGDH-223ENST00000641597 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
PHGDH-223ENST00000641597 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
PHGDH-223ENST00000641597 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 K7EP34 96 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 CD7P09564 240 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 FAM74A4Q5TZK3 123 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 SPCS1Q9Y6A9 102 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 RPL39P62891 51 aaKnown RBP12.57□□□□□ -0.4
PHGDH-223ENST00000641597 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
PHGDH-223ENST00000641597 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
PHGDH-223ENST00000641597 NEXN-AS1Q8NBZ9 246 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 BAALCQ8WXS3 180 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 KLLNB2CW77 178 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 F8VRH5 84 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 H3BUA1 57 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 NDUFS8O00217 210 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 PSMB8P28062 276 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 VPS25Q9BRG1 176 aa12.56□□□□□ -0.4
PHGDH-223ENST00000641597 B4DSR2 109 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 F5H697 171 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 SMIM13P0DJ93 91 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-223ENST00000641597 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 H7C1H1 209 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 SYNJ2BPP57105 145 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 CEND1Q8N111 149 aa12.55□□□□□ -0.4
PHGDH-223ENST00000641597 TSHBP01222 138 aa12.54□□□□□ -0.4
PHGDH-223ENST00000641597 PRM2P04554 102 aa12.54□□□□□ -0.4
PHGDH-223ENST00000641597 SUMO4Q6EEV6 95 aa12.54□□□□□ -0.4
PHGDH-223ENST00000641597 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
PHGDH-223ENST00000641597 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
PHGDH-223ENST00000641597 ORMDL2Q53FV1 153 aa12.54□□□□□ -0.4
PHGDH-223ENST00000641597 NBPF19A0A087WUL8 3843 aa12.53□□□□□ -0.4
PHGDH-223ENST00000641597 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
PHGDH-223ENST00000641597 KLHL30-AS1Q8NEE0 82 aa12.53□□□□□ -0.4
PHGDH-223ENST00000641597 C20orf78Q9BR46 151 aa12.53□□□□□ -0.4
PHGDH-223ENST00000641597 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms