RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 LGALS9BQ3B8N2 356 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 LINC01545Q5VT33 79 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 LGALS9CQ6DKI2 356 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 HIST2H2BCQ6DN03 193 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 ZNF575Q86XF7 245 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 Q8N976 141 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 DLX4Q92988 240 aaPredicted RBP6.21□□□□□ -1.42
PNKP-231ENST00000640501 C14orf144Q96I85 54 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 DOPEY2Q9Y3R5 2298 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 TEX15Q9BXT5 2789 aa6.21□□□□□ -1.42
PNKP-231ENST00000640501 CBY3A6NI87 242 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 H7C1H1 209 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 INSP01308 110 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 IGKV3-20P01619 116 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
PNKP-231ENST00000640501 FOSL1P15407 271 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 EDN2P20800 178 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 HNRNPA3P51991 378 aaKnown RBP6.2□□□□□ -1.42
PNKP-231ENST00000640501 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
PNKP-231ENST00000640501 SPINK13Q1W4C9 94 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 DEFB114Q30KQ6 69 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
PNKP-231ENST00000640501 LINC01006Q8NI28 216 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 SMIM2Q9BVW6 85 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
PNKP-231ENST00000640501 A8MTW9 85 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 OR11H12B2RN74 326 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 H0Y8G0 127 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 GNRH2O43555 120 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 NUDT3O95989 172 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 DEFB1P60022 68 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
PNKP-231ENST00000640501 ZNF415Q09FC8 603 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 PRR31Q5SQ13 230 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 Q6ZN92 141 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 STHQ8IWL8 128 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 LINC00467Q9BRT7 94 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 MAP6D1Q9H9H5 199 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 GOLT1BQ9Y3E0 138 aa6.19□□□□□ -1.42
PNKP-231ENST00000640501 FLNAP21333 2647 aaKnown RBP6.18□□□□□ -1.42
PNKP-231ENST00000640501 IGHV3-16A0A0C4DH30 117 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 F5H697 171 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 H3BMM0 161 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.18□□□□□ -1.42
PNKP-231ENST00000640501 PRSS1P07477 247 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 IGLC3P0DOY3 106 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 CD28P10747 220 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
PNKP-231ENST00000640501 ADAMTSL5Q6ZMM2 481 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 NRACQ8N912 160 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 PTH2Q96A98 100 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 KIR2DL4Q99706 377 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 CITED2Q99967 270 aaPredicted RBP6.18□□□□□ -1.42
PNKP-231ENST00000640501 C2orf88Q9BSF0 95 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 SPXQ9BT56 116 aa6.18□□□□□ -1.42
PNKP-231ENST00000640501 MXRA5Q9NR99 2828 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 A0A1W2PRX2 142 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 A8MWV9 139 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 VCYO14598 125 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 SAP30O75446 220 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 ZNF56Q15929 161 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 AMTNQ6UX39 209 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 TRPT1Q86TN4 253 aaKnown RBP6.17□□□□□ -1.42
PNKP-231ENST00000640501 NDUFA11Q86Y39 141 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 ATOH7Q8N100 152 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 Q8N1Y9 231 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 TMEM158Q8WZ71 300 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 FAM110AQ9BQ89 295 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 TMEM208Q9BTX3 173 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 C1QTNF4Q9BXJ3 329 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 MRPS16Q9Y3D3 137 aaKnown RBP6.17□□□□□ -1.42
PNKP-231ENST00000640501 SELENOKQ9Y6D0 94 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 ZANQ9Y493 2812 aa6.17□□□□□ -1.42
PNKP-231ENST00000640501 IGLV2-18A0A075B6J9 118 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 TRAV26-2A0A0B4J265 109 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 KNCNA6PVL3 124 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 RHODO00212 210 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 IGLL1P15814 213 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 PLNP26678 52 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 ZNF876PQ49A33 203 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 Q6ZQT7 251 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 LINC00173Q6ZV60 143 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 HELZ2Q9BYK8 2649 aaKnown RBP6.16□□□□□ -1.42
PNKP-231ENST00000640501 UNC79Q9P2D8 2635 aa6.16□□□□□ -1.42
PNKP-231ENST00000640501 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 MYO9AB2RTY4 2548 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 A0A096LNJ9 63 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 TRBV6-5A0A0K0K1A5 114 aa6.15□□□□□ -1.42
PNKP-231ENST00000640501 M0R2P5 195 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms