RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 CEND1Q8N111 149 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 ZFAND2AQ8N6M9 145 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 RHPN1-AS1Q9BWJ2 59 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 GPHB5Q86YW7 130 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 RASL10AQ92737 203 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 ZMAT4Q9H898 229 aa11.07□□□□□ -0.64
SCARB2-221ENST00000640341 ZNF462Q96JM2 2506 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 C2orf66Q6UXQ4 117 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 IGHV1-69DA0A0B4J2H0 117 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 H3BMG7 143 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 IGHV1-69P01742 117 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 CD300EQ496F6 205 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-221ENST00000640341 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
SCARB2-221ENST00000640341 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-221ENST00000640341 HTN1P15515 57 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 TEX48A0A1B0GUV7 120 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 H7C1H1 209 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
SCARB2-221ENST00000640341 F8VRH5 84 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 KLHL30-AS1Q8NEE0 82 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 U3KQE9 123 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 TRAV12-2A0A075B6T6 113 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 FAM223BA6NKX1 122 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
SCARB2-221ENST00000640341 CD7P09564 240 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 PLNP26678 52 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCARB2-221ENST00000640341 DUSP14O95147 198 aaKnown RBP11.03□□□□□ -0.64
SCARB2-221ENST00000640341 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 ORMDL2Q53FV1 153 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 ITLN2Q8WWU7 325 aaPredicted RBP11.03□□□□□ -0.64
SCARB2-221ENST00000640341 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 ZNF256Q9Y2P7 627 aaPredicted RBP11.03□□□□□ -0.64
SCARB2-221ENST00000640341 ATP5J2P56134 94 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 WFDC2Q14508 124 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 FAM159AQ6UWV7 190 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 NRGNQ92686 78 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 MRAP2Q96G30 205 aa11.03□□□□□ -0.64
SCARB2-221ENST00000640341 PRSS29PA6NIE9 313 aa11.02□□□□□ -0.64
SCARB2-221ENST00000640341 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.64
SCARB2-221ENST00000640341 C12orf74Q32Q52 190 aa11.02□□□□□ -0.64
SCARB2-221ENST00000640341 C10orf99Q6UWK7 81 aa11.02□□□□□ -0.64
SCARB2-221ENST00000640341 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.64
SCARB2-221ENST00000640341 DUX5Q96PT3 197 aa11.02□□□□□ -0.64
SCARB2-221ENST00000640341 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 OVOL1O14753 267 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 MAPK1IP1LQ8NDC0 245 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 TMEM238C9JI98 176 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 ETDBQ3ZM63 59 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 HIGD1BQ9P298 99 aa11.02□□□□□ -0.65
SCARB2-221ENST00000640341 CCDC168Q8NDH2 2452 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 IGLL5B9A064 214 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 NDUFA4O00483 81 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 CCL19Q99731 98 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 ABCA12Q86UK0 2595 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 G3V4G9 280 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 TGFAP01135 160 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 SLC25A16P16260 332 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 BAALCQ8WXS3 180 aa11.01□□□□□ -0.65
SCARB2-221ENST00000640341 LINC01546A6NGU7 62 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 APOMO95445 188 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 RNASE3P12724 160 aaKnown RBP11□□□□□ -0.65
SCARB2-221ENST00000640341 HLA-DRB4P13762 266 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 TP53TG1Q9Y2A0 90 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 HLA-DRB4X5D2U9 266 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 IGHV4-30-2A0A087WSY4 118 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 LOC107984156A0A0G2JMH3 177 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 PSMG4Q5JS54 123 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 TMEM170BQ5T4T1 132 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 ARL17AQ8IVW1 177 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
SCARB2-221ENST00000640341 IGSF10Q6WRI0 2623 aa11□□□□□ -0.65
SCARB2-221ENST00000640341 MUC4Q99102 2169 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 IGHV3-64A0A075B6Q5 118 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 TOMM6Q96B49 74 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 TM2D2Q9BX73 214 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 GTSF1LQ9H1H1 148 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 DAZ1Q9NQZ3 744 aaKnown RBP10.99□□□□□ -0.65
SCARB2-221ENST00000640341 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 WNK1Q9H4A3 2382 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 CLEC2AQ6UVW9 174 aa10.99□□□□□ -0.65
SCARB2-221ENST00000640341 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-221ENST00000640341 MRPL16Q9NX20 251 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms