RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 SLC51BQ86UW2 128 aa6.59□□□□□ -1.35
SCARB2-214ENST00000638843 C9orf62Q8N4C0 152 aa6.59□□□□□ -1.35
SCARB2-214ENST00000638843 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
SCARB2-214ENST00000638843 PRO0255Q9UI72 69 aa6.59□□□□□ -1.35
SCARB2-214ENST00000638843 ZFP30Q9Y2G7 519 aa6.59□□□□□ -1.35
SCARB2-214ENST00000638843 MUC4Q99102 2169 aa6.59□□□□□ -1.36
SCARB2-214ENST00000638843 PKHD1P08F94 4074 aa6.59□□□□□ -1.36
SCARB2-214ENST00000638843 PKD1P98161 4303 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 TRAV1-1A0A0B4J248 108 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 TRBV6-1A0A0K0K1D8 114 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 C9JCJ5 164 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 RTL8CO15255 209 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
SCARB2-214ENST00000638843 SULT1A2P50226 295 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 RAB5CP51148 216 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 UBE2G1P62253 170 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 C9orf85Q96MD7 179 aa6.58□□□□□ -1.36
SCARB2-214ENST00000638843 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 TRAV4A0A0B4J268 109 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 TRGV4A0A0C4DH28 118 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 SH2D1AO60880 128 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 ORM1P02763 201 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 AKR1C3P42330 323 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 SLAQ13239 276 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 NHLRC2Q8NBF2 726 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 PGPEP1LA6NFU8 196 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 B4DEV8 164 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 M0R036 132 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 ZNF674Q2M3X9 581 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 FAM162BQ5T6X4 162 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 CFAP126Q5VTH2 177 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 Q9H8V8 135 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 ICOSQ9Y6W8 199 aa6.57□□□□□ -1.36
SCARB2-214ENST00000638843 NBDYA0A0U1RRE5 68 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 KRBOX1C9JBD0 128 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 K7EQD1 137 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 GYPEP15421 78 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
SCARB2-214ENST00000638843 ZNF506Q5JVG8 444 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 UPK3BQ9BT76 320 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 DERL1Q9BUN8 251 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 MLST8Q9BVC4 326 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 MANBALQ9NQG1 85 aa6.56□□□□□ -1.36
SCARB2-214ENST00000638843 MRPS16Q9Y3D3 137 aaKnown RBP6.56□□□□□ -1.36
SCARB2-214ENST00000638843 TMSB15BA0A087X1C1 80 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 GRIFINA4D1Z8 144 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 RS1O15537 224 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 S100A9P06702 114 aaKnown RBP6.55□□□□□ -1.36
SCARB2-214ENST00000638843 ASIPP42127 132 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 RPL35P42766 123 aaKnown RBP6.55□□□□□ -1.36
SCARB2-214ENST00000638843 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-214ENST00000638843 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
SCARB2-214ENST00000638843 BAGE2Q86Y30 109 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 PTH2Q96A98 100 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 KRTAP1-5Q9BYS1 174 aa6.55□□□□□ -1.36
SCARB2-214ENST00000638843 IGHV3-73A0A0B4J1V6 119 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 H3BVH4 76 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 GATA1P15976 413 aaPredicted RBP6.54□□□□□ -1.36
SCARB2-214ENST00000638843 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 LINC00336Q6ZUF6 198 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 NEGR1Q7Z3B1 354 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 SLC25A29Q8N8R3 303 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 KIAA1109Q2LD37 5005 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
SCARB2-214ENST00000638843 NACAE9PAV3 2078 aa6.54□□□□□ -1.36
SCARB2-214ENST00000638843 PRSS29PA6NIE9 313 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 TEX46H3BTG2 121 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 SRIP30626 198 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 DNLZQ5SXM8 178 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 ALKAL2Q6UX46 152 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 Q6ZSN1 163 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 C11orf52Q96A22 123 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 JPT2Q9H910 190 aa6.53□□□□□ -1.36
SCARB2-214ENST00000638843 A0A1B0GVY2 172 aa6.52□□□□□ -1.36
SCARB2-214ENST00000638843 NXPH4O95158 308 aa6.52□□□□□ -1.36
SCARB2-214ENST00000638843 RPL19P84098 196 aaKnown RBP6.52□□□□□ -1.36
SCARB2-214ENST00000638843 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.36
SCARB2-214ENST00000638843 PCNPQ8WW12 178 aaKnown RBP6.52□□□□□ -1.36
SCARB2-214ENST00000638843 TXNDC17Q9BRA2 123 aa6.52□□□□□ -1.36
SCARB2-214ENST00000638843 SAMD10Q9BYL1 202 aa6.52□□□□□ -1.36
SCARB2-214ENST00000638843 SCRT2Q9NQ03 307 aa6.52□□□□□ -1.36
SCARB2-214ENST00000638843 TRBV6-4A0A1B0GX49 114 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 IGLV2-8P01709 118 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 BCL2P10415 239 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 CENPWQ5EE01 88 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 SOHLH1Q5JUK2 328 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 PIK3CD-AS1Q5SR53 167 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 PRR27Q6MZM9 219 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 UFSP1Q6NVU6 142 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 C6orf223Q8N319 242 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 PARLQ9H300 379 aa6.52□□□□□ -1.37
SCARB2-214ENST00000638843 HERC2O95714 4834 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms