RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 UBE2D1P51668 147 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 HHLA3Q9XRX5 114 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 ZNF833PQ6ZTB9 187 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 ATP6V0E2Q8NHE4 81 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 TRAV26-1A0A087WT03 109 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 PRO1854Q9UHT4 67 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 B5MCH6 92 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 J3QQQ9 107 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 TMEM61Q8N0U2 210 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 SIGLEC8Q9NYZ4 499 aa13.35□□□□□ -0.27
CACNA1A-253ENST00000637927 LYPD1Q8N2G4 141 aa13.34□□□□□ -0.27
CACNA1A-253ENST00000637927 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
CACNA1A-253ENST00000637927 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
CACNA1A-253ENST00000637927 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
CACNA1A-253ENST00000637927 DLEU1O43261 78 aa13.34□□□□□ -0.27
CACNA1A-253ENST00000637927 SLC25A29Q8N8R3 303 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 KIF26AQ9ULI4 1882 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 LTAP01374 205 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 THSD7BQ9C0I4 1608 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 K7EQD1 137 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 PSMB8P28062 276 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 B9D2Q9BPU9 175 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 HERV-K104P63124 156 aa13.33□□□□□ -0.28
CACNA1A-253ENST00000637927 PRSS46E5RG02 174 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 LOXP28300 417 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 DEFB113Q30KQ7 82 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 PRSS33Q8NF86 280 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 LY6G6EA0A0G2JKS1 128 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 DEFB125Q8N687 156 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 U3KQA8 63 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 IGLC2P0DOY2 106 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 BLCAPP62952 87 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 DSCAML1Q8TD84 2053 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 RLFQ13129 1914 aa13.32□□□□□ -0.28
CACNA1A-253ENST00000637927 ZNF491Q8N8L2 437 aa13.31□□□□□ -0.28
CACNA1A-253ENST00000637927 CLEC2BQ92478 149 aa13.31□□□□□ -0.28
CACNA1A-253ENST00000637927 FAM19A5Q7Z5A7 132 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-253ENST00000637927 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-253ENST00000637927 TRBV19A0A075B6N1 114 aa13.31□□□□□ -0.28
CACNA1A-253ENST00000637927 PROK2Q9HC23 129 aa13.31□□□□□ -0.28
CACNA1A-253ENST00000637927 TEX49A0A1B0GTD5 131 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 TANC2Q9HCD6 1990 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 NDUFA4O00483 81 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 ZNF524Q96C55 264 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 SND1-IT1Q9HBX3 110 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 CNOT1A5YKK6 2376 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 C3orf22Q8N5N4 141 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 RITA1Q96K30 269 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 TRBV24-1A0A075B6N3 115 aa13.3□□□□□ -0.28
CACNA1A-253ENST00000637927 FAM19A1Q7Z5A9 133 aa13.29□□□□□ -0.28
CACNA1A-253ENST00000637927 ARHGAP21Q5T5U3 1957 aa13.29□□□□□ -0.28
CACNA1A-253ENST00000637927 WNK2Q9Y3S1 2297 aa13.29□□□□□ -0.28
CACNA1A-253ENST00000637927 PLA2G1BP04054 148 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-253ENST00000637927 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 DCANP1Q8TF63 244 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 C9orf118A6NHY6 69 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 H3BRN7 92 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 ADAMTS9Q9P2N4 1935 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 UBE2D3P61077 147 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 PPDPFLQ8WWR9 84 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 VOPP1Q96AW1 172 aa13.28□□□□□ -0.28
CACNA1A-253ENST00000637927 ATP5G1P05496 136 aa13.27□□□□□ -0.28
CACNA1A-253ENST00000637927 CCL25O15444 150 aa13.27□□□□□ -0.28
CACNA1A-253ENST00000637927 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.28
CACNA1A-253ENST00000637927 ADCYAP1P18509 176 aa13.27□□□□□ -0.29
CACNA1A-253ENST00000637927 WT1-ASQ06250 92 aa13.27□□□□□ -0.29
CACNA1A-253ENST00000637927 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 TRAV1-1A0A0B4J248 108 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 C9JQL5 133 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 LY96Q9Y6Y9 160 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 WI2-2373I1.2A0A1W2PRP0 233 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 SMIM27A0A1W2PRY6 76 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 PRSS47A8MTI9 375 aa13.26□□□□□ -0.29
CACNA1A-253ENST00000637927 SIP14410 1827 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 TRAV23DV6A0A075B6W5 121 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 PDE6HQ13956 83 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 AJUBAQ96IF1 538 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 ZNF726P1Q15940 193 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 CFPP27918 469 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 WT1P19544 449 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM215AQ9Y5M1 114 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 P0DMU3 169 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM231AP0DMU4 169 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 FAM231CP0DMU5 169 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 C18orf32Q8TCD1 76 aa13.25□□□□□ -0.29
CACNA1A-253ENST00000637927 CEMP1Q6PRD7 247 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 SMAD5-AS1Q9Y6J3 95 aa13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 YPEL3P61236 119 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-253ENST00000637927 PYY3Q5JQD4 70 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms