RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 KLK5Q9Y337 293 aaPredicted RBP5.6□□□□□ -1.51
PNKP-229ENST00000637897 HIGD1CA8MV81 97 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 SNURFLB1AK76 121 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 CRXO43186 299 aaPredicted RBP5.59□□□□□ -1.51
PNKP-229ENST00000637897 IGKV3-20P01619 116 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 SMIM6P0DI80 62 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 Q6AWC8 147 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 LINC00518Q8N0U6 118 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 NUP35Q8NFH5 326 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 ZC2HC1AQ96GY0 325 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 NEU1Q99519 415 aa5.59□□□□□ -1.51
PNKP-229ENST00000637897 MRPL18Q9H0U6 180 aaKnown RBP5.59□□□□□ -1.51
PNKP-229ENST00000637897 IGKV2-40A0A087WW87 121 aaPredicted RBP5.58□□□□□ -1.52
PNKP-229ENST00000637897 A0A0J9YX75 114 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 IGLL5B9A064 214 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 IGKV2D-40P01614 121 aaPredicted RBP5.58□□□□□ -1.52
PNKP-229ENST00000637897 FOXA3P55318 350 aaPredicted RBP5.58□□□□□ -1.52
PNKP-229ENST00000637897 RPS20P60866 119 aaKnown RBP5.58□□□□□ -1.52
PNKP-229ENST00000637897 RAB4BP61018 213 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 FAM162BQ5T6X4 162 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 MRPL54Q6P161 138 aaKnown RBP5.58□□□□□ -1.52
PNKP-229ENST00000637897 TMEM136Q6ZRR5 245 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 C16orf92Q96LL3 132 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 CLUHP3Q96NS8 147 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 PPP1R14DQ9NXH3 145 aa5.58□□□□□ -1.52
PNKP-229ENST00000637897 IGHV4-4A0A075B6R2 117 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 A0A1B0GW15 77 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 A0A1B0GXF2 115 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 PLAC8L1A1L4L8 177 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 SPINK4O60575 86 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 APCSP02743 223 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 CRISP2P16562 243 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 HBBP68871 147 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 TMEM78Q5T7P6 136 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 FOXI2Q6ZQN5 318 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 VGLL1Q99990 258 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 LENEPQ9Y5L5 61 aa5.57□□□□□ -1.52
PNKP-229ENST00000637897 NACAE9PAV3 2078 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 TMEM189A5PLL7 270 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 IFITM10A6NMD0 228 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 FABP5P3A8MUU1 101 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 SH2D1AO60880 128 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 CRIP1P50238 77 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 ZNF138P52744 262 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 SNRPD3P62318 126 aaKnown RBP5.56□□□□□ -1.52
PNKP-229ENST00000637897 Q0VG73 95 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 KIR3DS1Q14943 382 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 OR10J3Q5JRS4 329 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
PNKP-229ENST00000637897 GFI1BQ5VTD9 330 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 RNF182Q8N6D2 247 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 ZNF738Q8NE65 137 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 GTSF1Q8WW33 167 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 BORCS7Q96B45 105 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 C8orf49Q96NF6 230 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 C12orf57Q99622 126 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 DKK2Q9UBU2 259 aa5.56□□□□□ -1.52
PNKP-229ENST00000637897 LRP1BQ9NZR2 4599 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 DEFB131BA0A096LNP1 70 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 TRAV10A0A0B4J240 114 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 A0A1B0GUT8 65 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 AMBPP02760 352 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 FABP4P15090 132 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 AZU1P20160 251 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 ID1P41134 155 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 HIST1H1AQ02539 215 aaPredicted RBP5.55□□□□□ -1.52
PNKP-229ENST00000637897 RIGQ13278 110 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 PDZD11Q5EBL8 140 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 OR10J6PQ8NGY7 276 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 Q8TAT8 98 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 LINC00477Q96M19 166 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 HIST1H2BLQ99880 126 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 AGPAT4-IT1Q9H0P7 198 aa5.55□□□□□ -1.52
PNKP-229ENST00000637897 IGHV3OR16-12A0A075B7B8 117 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 TRBV7-9A0A0J9YWB2 115 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 PRAC2D3DTV9 90 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 M0R2Z0 102 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 RTL8CO15255 209 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 ESDP10768 282 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 CAMPP49913 170 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 TCTAP57738 103 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 ERCC8Q13216 396 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 DNLZQ5SXM8 178 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 FAM222AQ5U5X8 452 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 BAGE3Q86Y29 109 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 GATD1Q8NB37 220 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 OR10D4PQ8NGN7 298 aa5.54□□□□□ -1.52
PNKP-229ENST00000637897 PACRGQ96M98 296 aaPredicted RBP5.54□□□□□ -1.52
PNKP-229ENST00000637897 HSPG2P98160 4391 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 TRAV12-2A0A075B6T6 113 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 GRIFINA4D1Z8 144 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 GZMBP10144 247 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 SRIP30626 198 aa5.53□□□□□ -1.52
PNKP-229ENST00000637897 EMP1P54849 157 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms