RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RASL10AQ92737 203 aa11.34□□□□□ -0.59
CLN6-216ENST00000636876 PTH2Q96A98 100 aa11.34□□□□□ -0.59
CLN6-216ENST00000636876 ISOC2Q96AB3 205 aa11.34□□□□□ -0.59
CLN6-216ENST00000636876 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
CLN6-216ENST00000636876 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
CLN6-216ENST00000636876 GZMBP10144 247 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 ERVFC1-1P60608 527 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 C18orf15Q96N68 181 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 OSTCQ9NRP0 149 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 CSMD3Q7Z407 3707 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
CLN6-216ENST00000636876 ATP5G1P05496 136 aa11.32□□□□□ -0.6
CLN6-216ENST00000636876 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
CLN6-216ENST00000636876 ZFAND6Q6FIF0 208 aa11.32□□□□□ -0.6
CLN6-216ENST00000636876 STARD9Q9P2P6 4700 aa11.32□□□□□ -0.6
CLN6-216ENST00000636876 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 C3orf84H3BNL1 204 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 SNAI2O43623 268 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 HTN3P15516 51 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 CT83Q5H943 113 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 NDUFAF3Q9BU61 184 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 SSBP4Q9BWG4 385 aaPredicted RBP11.31□□□□□ -0.6
CLN6-216ENST00000636876 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
CLN6-216ENST00000636876 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
CLN6-216ENST00000636876 F8W036 122 aa11.3□□□□□ -0.6
CLN6-216ENST00000636876 ADCYAP1P18509 176 aa11.3□□□□□ -0.6
CLN6-216ENST00000636876 PIK3CD-AS1Q5SR53 167 aa11.3□□□□□ -0.6
CLN6-216ENST00000636876 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
CLN6-216ENST00000636876 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
CLN6-216ENST00000636876 A8MWL6 223 aa11.29□□□□□ -0.6
CLN6-216ENST00000636876 PNRC1Q12796 327 aaPredicted RBP11.29□□□□□ -0.6
CLN6-216ENST00000636876 ZFP82Q8N141 532 aa11.29□□□□□ -0.6
CLN6-216ENST00000636876 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
CLN6-216ENST00000636876 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
CLN6-216ENST00000636876 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
CLN6-216ENST00000636876 SEC11CQ9BY50 192 aa11.29□□□□□ -0.6
CLN6-216ENST00000636876 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 M0R381 172 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 NXPH4O95158 308 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 POM121L12Q8N7R1 296 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 V9GYV3 84 aa11.28□□□□□ -0.6
CLN6-216ENST00000636876 F2Z2F3 143 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 F5H768 121 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 RS1O15537 224 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 IGHV3-53P01767 116 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 CTRLP40313 264 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 KLK5Q9Y337 293 aaPredicted RBP11.27□□□□□ -0.61
CLN6-216ENST00000636876 RYR2Q92736 4967 aa11.27□□□□□ -0.61
CLN6-216ENST00000636876 SACSQ9NZJ4 4579 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 HOXA5P20719 270 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 TSKUQ8WUA8 353 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 GTSF1Q8WW33 167 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 ZNF479Q96JC4 524 aa11.26□□□□□ -0.61
CLN6-216ENST00000636876 PLECQ15149 4684 aaKnown RBP11.25□□□□□ -0.61
CLN6-216ENST00000636876 A8MWV9 139 aa11.25□□□□□ -0.61
CLN6-216ENST00000636876 CACNG7P62955 275 aa11.25□□□□□ -0.61
CLN6-216ENST00000636876 C10orf91Q5T1B1 145 aa11.25□□□□□ -0.61
CLN6-216ENST00000636876 GFRA4Q9GZZ7 299 aa11.25□□□□□ -0.61
CLN6-216ENST00000636876 JPT2Q9H910 190 aa11.25□□□□□ -0.61
CLN6-216ENST00000636876 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
CLN6-216ENST00000636876 IGLL5B9A064 214 aa11.24□□□□□ -0.61
CLN6-216ENST00000636876 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
CLN6-216ENST00000636876 FHL2Q14192 279 aa11.24□□□□□ -0.61
CLN6-216ENST00000636876 WDR73Q6P4I2 378 aa11.24□□□□□ -0.61
CLN6-216ENST00000636876 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
CLN6-216ENST00000636876 CARHSP1Q9Y2V2 147 aaKnown RBP11.24□□□□□ -0.61
CLN6-216ENST00000636876 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 TRGV4A0A0C4DH28 118 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 PPP1R2P9O14990 202 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 CIDEAO60543 219 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 MT-ND4LP03901 98 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 SSTP61278 116 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 RNF212Q495C1 297 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
CLN6-216ENST00000636876 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
CLN6-216ENST00000636876 SLAQ13239 276 aa11.22□□□□□ -0.61
CLN6-216ENST00000636876 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
CLN6-216ENST00000636876 SLC7A5P1Q8MH63 180 aa11.22□□□□□ -0.61
CLN6-216ENST00000636876 SAMD10Q9BYL1 202 aa11.22□□□□□ -0.61
CLN6-216ENST00000636876 TRAV26-1A0A087WT03 109 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms