RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 ZFAND2AQ8N6M9 145 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 IGSF10Q6WRI0 2623 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 F5H697 171 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 RASL10AQ92737 203 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 RHPN1-AS1Q9BWJ2 59 aa10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 ANKRD17O75179 2603 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-228ENST00000636610 ATP5LO75964 103 aa10.62□□□□□ -0.71
CACNA1A-228ENST00000636610 SMIM2Q9BVW6 85 aa10.62□□□□□ -0.71
CACNA1A-228ENST00000636610 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
CACNA1A-228ENST00000636610 HTN1P15515 57 aa10.62□□□□□ -0.71
CACNA1A-228ENST00000636610 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-228ENST00000636610 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
CACNA1A-228ENST00000636610 TRAV12-2A0A075B6T6 113 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 ASIPP42127 132 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 KLHL30-AS1Q8NEE0 82 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 DUX5Q96PT3 197 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 ZMAT4Q9H898 229 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 FBN2P35556 2912 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 ITLN2Q8WWU7 325 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 DOPEY1Q5JWR5 2465 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 NAV2Q8IVL1 2488 aa10.61□□□□□ -0.71
CACNA1A-228ENST00000636610 A0A087WX48 190 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 H3BMG7 143 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 SIVA1O15304 175 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 C2orf66Q6UXQ4 117 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 CEND1Q8N111 149 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 CHTOPQ9Y3Y2 248 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 U3KQE9 123 aa10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-228ENST00000636610 TRAV21A0A0B4J279 112 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 TEX48A0A1B0GUV7 120 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 DUSP14O95147 198 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 UCNP55089 124 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 ZNF688P0C7X2 276 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 ZNF462Q96JM2 2506 aa10.59□□□□□ -0.71
CACNA1A-228ENST00000636610 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 OR11H12B2RN74 326 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 ATP5J2P56134 94 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 WFDC2Q14508 124 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 OR11H2Q8NH07 326 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 TMEM190Q8WZ59 177 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 LINC00477Q96M19 166 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 TEX15Q9BXT5 2789 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 AVPP01185 164 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 SCGB1D4Q6XE38 83 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 NF1P21359 2839 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 TGFAP01135 160 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 CD7P09564 240 aa10.58□□□□□ -0.72
CACNA1A-228ENST00000636610 JMJD1CQ15652 2540 aa10.57□□□□□ -0.72
CACNA1A-228ENST00000636610 PRSS29PA6NIE9 313 aa10.57□□□□□ -0.72
CACNA1A-228ENST00000636610 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
CACNA1A-228ENST00000636610 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
CACNA1A-228ENST00000636610 ZNF479Q96JC4 524 aa10.57□□□□□ -0.72
CACNA1A-228ENST00000636610 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
CACNA1A-228ENST00000636610 F8VRH5 84 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 H7C1H1 209 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 KLK9Q9UKQ9 250 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 IGHV3-64A0A075B6Q5 118 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 SLC25A16P16260 332 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 C12orf74Q32Q52 190 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 PLEKHB2Q96CS7 222 aa10.56□□□□□ -0.72
CACNA1A-228ENST00000636610 FAM223BA6NKX1 122 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 PRM2P04554 102 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 ETDBQ3ZM63 59 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 FAM223AQ8IWN6 122 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 BAALCQ8WXS3 180 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 CCL19Q99731 98 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 IGLL5B9A064 214 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 PSMG4Q5JS54 123 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 PHLDA1Q8WV24 401 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 SMPXQ9UHP9 88 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 ZNF815PA8K554 130 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 NDUFA4O00483 81 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
CACNA1A-228ENST00000636610 NIPBLQ6KC79 2804 aaeCLIP10.54□□□□□ -0.72
CACNA1A-228ENST00000636610 APOMO95445 188 aa10.54□□□□□ -0.72
CACNA1A-228ENST00000636610 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
CACNA1A-228ENST00000636610 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
CACNA1A-228ENST00000636610 G3V4G9 280 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms