RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 C20orf173Q96LM9 149 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.62
CACNA1A-220ENST00000635988 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 MT-ATP8P03928 68 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 IGF1P05019 195 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 KALRNO60229 2985 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 FAM223BA6NKX1 122 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 TCL1BO95988 128 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 FAM223AQ8IWN6 122 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 TIMM17AQ99595 171 aa11.2□□□□□ -0.62
CACNA1A-220ENST00000635988 NXPH4O95158 308 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 IGHV3-30P01768 117 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 ZNF688P0C7X2 276 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 IGHV3-30-5P0DP03 117 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 XGP55808 180 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 SFTA2Q6UW10 78 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 MAP1BP46821 2468 aaKnown RBP11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 APC2O95996 2303 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 C11orf71Q6IPW1 123 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 PRO1854Q9UHT4 67 aa11.19□□□□□ -0.62
CACNA1A-220ENST00000635988 M0QXV9 152 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 VCYO14598 125 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 CFC1BP0CG36 223 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 CFC1P0CG37 223 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 ZFP36P26651 326 aaKnown RBP11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 PTH2Q96A98 100 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 KIR2DL4Q99706 377 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 WNK2Q9Y3S1 2297 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 TSHBP01222 138 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 SCGB1C2P0DMR2 95 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 FHL3Q13643 280 aa11.18□□□□□ -0.62
CACNA1A-220ENST00000635988 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 GRNP28799 593 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 CNOT1A5YKK6 2376 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 DMXL2Q8TDJ6 3036 aa11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 SOCS3O14543 225 aa11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 SPRY2O43597 315 aa11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 POLR2KP53803 58 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 AJUBAQ96IF1 538 aa11.17□□□□□ -0.62
CACNA1A-220ENST00000635988 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 SAA4P35542 130 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 ARL3P36405 182 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 KIF25-AS1Q9Y6Z4 181 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 CACNA1HO95180 2353 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 BDP1A6H8Y1 2624 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 NDUFA4O00483 81 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 GNRH2O43555 120 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 EP300Q09472 2414 aaPredicted RBP11.16□□□□□ -0.62
CACNA1A-220ENST00000635988 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.62
CACNA1A-220ENST00000635988 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
CACNA1A-220ENST00000635988 LINC00315P59091 139 aa11.15□□□□□ -0.62
CACNA1A-220ENST00000635988 ZNF876PQ49A33 203 aa11.15□□□□□ -0.62
CACNA1A-220ENST00000635988 J3QQQ9 107 aa11.15□□□□□ -0.62
CACNA1A-220ENST00000635988 ANKRD29Q8N6D5 301 aa11.15□□□□□ -0.62
CACNA1A-220ENST00000635988 ADGRG4Q8IZF6 3080 aa11.14□□□□□ -0.63
CACNA1A-220ENST00000635988 Q6ZS46 218 aa11.14□□□□□ -0.63
CACNA1A-220ENST00000635988 EMP1P54849 157 aa11.14□□□□□ -0.63
CACNA1A-220ENST00000635988 CRIP2P52943 208 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 SLC25A20O43772 301 aa11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 AMELXQ99217 191 aa11.13□□□□□ -0.63
CACNA1A-220ENST00000635988 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 NPFFO15130 113 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 RPL39P62891 51 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 FAM159AQ6UWV7 190 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 UNQ9165/PRO28630Q6UXU0 137 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CACNA1A-220ENST00000635988 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 MGAQ8IWI9 3026 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 SDHAF1A6NFY7 115 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 CCL21O00585 134 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 LEPROTO15243 131 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 P0DMU3 169 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 FAM231AP0DMU4 169 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 FAM231CP0DMU5 169 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 ANAPC13Q9BS18 74 aa11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-220ENST00000635988 ACACAQ13085 2346 aa11.1□□□□□ -0.63
CACNA1A-220ENST00000635988 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms