RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 RTL8CO15255 209 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 CRIP1P50238 77 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 CCL20P78556 96 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 TTC32Q5I0X7 151 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 PTH2Q96A98 100 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 TXNDC17Q9BRA2 123 aa10.84□□□□□ -0.67
LINC00339-207ENST00000634712 KRBOX1C9JBD0 128 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 K7EQD1 137 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 RS1O15537 224 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 IFNA1P01562 189 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 ZNF674Q2M3X9 581 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 ZNF506Q5JVG8 444 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 CFAP126Q5VTH2 177 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 NHLRC2Q8NBF2 726 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 BIRC6Q9NR09 4857 aa10.83□□□□□ -0.68
LINC00339-207ENST00000634712 DNAH2Q9P225 4427 aa10.82□□□□□ -0.68
LINC00339-207ENST00000634712 GRIFINA4D1Z8 144 aa10.82□□□□□ -0.68
LINC00339-207ENST00000634712 LYPD5Q6UWN5 251 aa10.82□□□□□ -0.68
LINC00339-207ENST00000634712 SYT8Q8NBV8 401 aa10.82□□□□□ -0.68
LINC00339-207ENST00000634712 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
LINC00339-207ENST00000634712 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
LINC00339-207ENST00000634712 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
LINC00339-207ENST00000634712 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
LINC00339-207ENST00000634712 H3BVH4 76 aa10.81□□□□□ -0.68
LINC00339-207ENST00000634712 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-207ENST00000634712 SH2D6Q7Z4S9 175 aa10.81□□□□□ -0.68
LINC00339-207ENST00000634712 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
LINC00339-207ENST00000634712 C9orf62Q8N4C0 152 aa10.81□□□□□ -0.68
LINC00339-207ENST00000634712 A8MWV9 139 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 SIVA1O15304 175 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 NXPH4O95158 308 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 ARMS2P0C7Q2 107 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 LINC01559Q495D7 138 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 PIK3CD-AS1Q5SR53 167 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 DNLZQ5SXM8 178 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
LINC00339-207ENST00000634712 A0A1W2PPQ1 181 aa10.79□□□□□ -0.68
LINC00339-207ENST00000634712 RPL35P42766 123 aaKnown RBP10.79□□□□□ -0.68
LINC00339-207ENST00000634712 RHOHQ15669 191 aa10.79□□□□□ -0.68
LINC00339-207ENST00000634712 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
LINC00339-207ENST00000634712 LOC100131303A0A0U1RQF7 123 aa10.78□□□□□ -0.68
LINC00339-207ENST00000634712 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
LINC00339-207ENST00000634712 PDE6DO43924 150 aa10.78□□□□□ -0.68
LINC00339-207ENST00000634712 MGST1P10620 155 aaKnown RBP10.78□□□□□ -0.68
LINC00339-207ENST00000634712 PRR27Q6MZM9 219 aa10.78□□□□□ -0.68
LINC00339-207ENST00000634712 MLST8Q9BVC4 326 aa10.78□□□□□ -0.68
LINC00339-207ENST00000634712 MEF2BQ02080 365 aaPredicted RBP10.77□□□□□ -0.68
LINC00339-207ENST00000634712 DMRTA1Q5VZB9 504 aa10.77□□□□□ -0.68
LINC00339-207ENST00000634712 ZFP2Q6ZN57 461 aa10.77□□□□□ -0.68
LINC00339-207ENST00000634712 C11orf52Q96A22 123 aa10.77□□□□□ -0.68
LINC00339-207ENST00000634712 PARLQ9H300 379 aa10.77□□□□□ -0.68
LINC00339-207ENST00000634712 DNAH17Q9UFH2 4485 aa10.77□□□□□ -0.68
LINC00339-207ENST00000634712 TAGLN2P37802 199 aaKnown RBP10.77□□□□□ -0.69
LINC00339-207ENST00000634712 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
LINC00339-207ENST00000634712 VAX2Q9UIW0 290 aa10.77□□□□□ -0.69
LINC00339-207ENST00000634712 TRAV9-2A0A087WT02 112 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 A0A1B0GVG6 124 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 M0R381 172 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 BCL2P10415 239 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 BLOC1S1P78537 153 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 ALKAL2Q6UX46 152 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 DAZAP1Q96EP5 407 aaKnown RBP10.76□□□□□ -0.69
LINC00339-207ENST00000634712 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 JPT2Q9H910 190 aa10.76□□□□□ -0.69
LINC00339-207ENST00000634712 FAT2Q9NYQ8 4349 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 RHODO00212 210 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 BTF3P20290 206 aaKnown RBP10.75□□□□□ -0.69
LINC00339-207ENST00000634712 GNG4P50150 75 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 RPL19P84098 196 aaKnown RBP10.75□□□□□ -0.69
LINC00339-207ENST00000634712 CENPWQ5EE01 88 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 LY96Q9Y6Y9 160 aa10.75□□□□□ -0.69
LINC00339-207ENST00000634712 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
LINC00339-207ENST00000634712 MED14OSP0DP75 135 aa10.74□□□□□ -0.69
LINC00339-207ENST00000634712 NKX2-5P52952 324 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-207ENST00000634712 FAM74A4Q5TZK3 123 aa10.74□□□□□ -0.69
LINC00339-207ENST00000634712 SAMD10Q9BYL1 202 aa10.74□□□□□ -0.69
LINC00339-207ENST00000634712 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 RAB19A4D1S5 217 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 CXCL1P09341 107 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 EVI2AP22794 236 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 ZNF575Q86XF7 245 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 ATP6V0E2Q8NHE4 81 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 SFRP2Q96HF1 295 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 BIN3Q9NQY0 253 aa10.73□□□□□ -0.69
LINC00339-207ENST00000634712 A0A087WWL8 130 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 TIRAPP58753 221 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 TNP2Q05952 138 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 Q6ZSN1 163 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 SMIM12Q96EX1 92 aa10.72□□□□□ -0.69
LINC00339-207ENST00000634712 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 K7EP13 123 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 GAGE1Q13065 139 aa10.71□□□□□ -0.69
LINC00339-207ENST00000634712 GAGE4Q13068 117 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms