RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 SMIM12Q96EX1 92 aa13.33□□□□□ -0.28
PNKP-224ENST00000631020 IGKV3D-20A0A0C4DH25 116 aa13.32□□□□□ -0.28
PNKP-224ENST00000631020 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
PNKP-224ENST00000631020 TRGC2P03986 189 aa13.32□□□□□ -0.28
PNKP-224ENST00000631020 MGST1P10620 155 aaKnown RBP13.32□□□□□ -0.28
PNKP-224ENST00000631020 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
PNKP-224ENST00000631020 ZNF575Q86XF7 245 aa13.32□□□□□ -0.28
PNKP-224ENST00000631020 C11orf72Q8NBR9 251 aa13.32□□□□□ -0.28
PNKP-224ENST00000631020 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
PNKP-224ENST00000631020 K7EN84 100 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 OR5I1Q13606 314 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 PRR27Q6MZM9 219 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 ZNF493Q6ZR52 646 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 C16orf74Q96GX8 76 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 MDFICQ9P1T7 246 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 LY96Q9Y6Y9 160 aa13.31□□□□□ -0.28
PNKP-224ENST00000631020 HYDINQ4G0P3 5121 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BKO60814 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BJP06899 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BOP23527 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BBP33778 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BDP58876 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BCP62807 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST2H2BEQ16778 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BHQ93079 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BNQ99877 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 HIST1H2BMQ99879 126 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 GSN-AS1Q9NRJ2 163 aa13.3□□□□□ -0.28
PNKP-224ENST00000631020 TMEM189A5PLL7 270 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 ORM1P02763 201 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 TYMSP04818 313 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 LINC01551Q86U37 167 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 C11orf45Q8TAV5 145 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 PHLDA1Q8WV24 401 aaPredicted RBP13.29□□□□□ -0.28
PNKP-224ENST00000631020 KCNS1Q96KK3 526 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 C19orf71A6NCJ1 209 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
PNKP-224ENST00000631020 IGHV3-16A0A0C4DH30 117 aa13.28□□□□□ -0.28
PNKP-224ENST00000631020 IBA57Q5T440 356 aaKnown RBP13.28□□□□□ -0.28
PNKP-224ENST00000631020 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
PNKP-224ENST00000631020 DKK2Q9UBU2 259 aa13.28□□□□□ -0.28
PNKP-224ENST00000631020 TRGV11A0A075B6L2 103 aa13.27□□□□□ -0.29
PNKP-224ENST00000631020 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
PNKP-224ENST00000631020 RPL19P84098 196 aaKnown RBP13.27□□□□□ -0.29
PNKP-224ENST00000631020 LINC01559Q495D7 138 aa13.27□□□□□ -0.29
PNKP-224ENST00000631020 FAM222AQ5U5X8 452 aa13.27□□□□□ -0.29
PNKP-224ENST00000631020 FRZBQ92765 325 aa13.27□□□□□ -0.29
PNKP-224ENST00000631020 TIMM8BQ9Y5J9 83 aaPredicted RBP13.27□□□□□ -0.29
PNKP-224ENST00000631020 TMSB15BA0A087X1C1 80 aa13.26□□□□□ -0.29
PNKP-224ENST00000631020 A0A1W2PPQ1 181 aa13.26□□□□□ -0.29
PNKP-224ENST00000631020 TCL1AP56279 114 aa13.26□□□□□ -0.29
PNKP-224ENST00000631020 SFRP2Q96HF1 295 aa13.26□□□□□ -0.29
PNKP-224ENST00000631020 GRIFINA4D1Z8 144 aa13.25□□□□□ -0.29
PNKP-224ENST00000631020 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
PNKP-224ENST00000631020 DAZ2Q13117 558 aaKnown RBP13.25□□□□□ -0.29
PNKP-224ENST00000631020 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
PNKP-224ENST00000631020 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
PNKP-224ENST00000631020 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
PNKP-224ENST00000631020 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
PNKP-224ENST00000631020 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
PNKP-224ENST00000631020 RNASE3P12724 160 aaKnown RBP13.24□□□□□ -0.29
PNKP-224ENST00000631020 TCTAP57738 103 aa13.24□□□□□ -0.29
PNKP-224ENST00000631020 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
PNKP-224ENST00000631020 OR10G8Q8NGN5 311 aa13.24□□□□□ -0.29
PNKP-224ENST00000631020 DAZAP1Q96EP5 407 aaKnown RBP13.24□□□□□ -0.29
PNKP-224ENST00000631020 RNASE7Q9H1E1 156 aaKnown RBP13.24□□□□□ -0.29
PNKP-224ENST00000631020 LY6G6CO95867 125 aa13.23□□□□□ -0.29
PNKP-224ENST00000631020 DNLZQ5SXM8 178 aa13.23□□□□□ -0.29
PNKP-224ENST00000631020 LYRM9A8MSI8 78 aa13.23□□□□□ -0.29
PNKP-224ENST00000631020 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
PNKP-224ENST00000631020 HIST3H2BBQ8N257 126 aa13.23□□□□□ -0.29
PNKP-224ENST00000631020 SPINK4O60575 86 aa13.22□□□□□ -0.29
PNKP-224ENST00000631020 P01737 135 aa13.22□□□□□ -0.29
PNKP-224ENST00000631020 ASIPP42127 132 aa13.22□□□□□ -0.29
PNKP-224ENST00000631020 LGALS9CQ6DKI2 356 aa13.22□□□□□ -0.29
PNKP-224ENST00000631020 Q6ZTI0 123 aa13.22□□□□□ -0.29
PNKP-224ENST00000631020 C9orf85Q96MD7 179 aa13.22□□□□□ -0.29
PNKP-224ENST00000631020 PHOX2AO14813 284 aa13.21□□□□□ -0.29
PNKP-224ENST00000631020 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
PNKP-224ENST00000631020 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.29
PNKP-224ENST00000631020 SPXQ9BT56 116 aa13.21□□□□□ -0.29
PNKP-224ENST00000631020 MUC4Q99102 2169 aa13.2□□□□□ -0.3
PNKP-224ENST00000631020 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
PNKP-224ENST00000631020 DEFB130BP0DP73 79 aa13.2□□□□□ -0.3
PNKP-224ENST00000631020 DEFB130AP0DP74 79 aa13.2□□□□□ -0.3
PNKP-224ENST00000631020 GZMBP10144 247 aa13.2□□□□□ -0.3
PNKP-224ENST00000631020 FAM231DQ6ZW35 169 aa13.2□□□□□ -0.3
PNKP-224ENST00000631020 MRPL16Q9NX20 251 aaKnown RBP13.2□□□□□ -0.3
PNKP-224ENST00000631020 EPPK1P58107 5090 aaKnown RBP13.2□□□□□ -0.3
PNKP-224ENST00000631020 TRGV1A0A0A0MS02 117 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 TEX48A0A1B0GUV7 120 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 GAGE7O76087 117 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
PNKP-224ENST00000631020 S100A4P26447 101 aaKnown RBP13.19□□□□□ -0.3
PNKP-224ENST00000631020 ERVFC1-1P60608 527 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms