RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	GAGE12J	A6NER3	117 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	SMKR1	H3BMG3	65 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659		H7C1H1	209 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE7	O76087	117 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE12F	P0CL80	117 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE12G	P0CL81	117 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE12I	P0CL82	117 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	UBE2D1	P51668	147 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE4	Q13068	117 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	FHL3	Q13643	280 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	C5orf56	Q8N8D9	126 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	MOB4	Q9Y3A3	225 aa		11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	USP9Y	O00507	2555 aa	Predicted RBP	11.75	□□□□□ -0.53
BBS1-225	ENST00000630659	ANKRD17	O75179	2603 aa	Known RBP	11.75	□□□□□ -0.53
BBS1-225	ENST00000630659		F8VRH5	84 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	AVP	P01185	164 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	C8orf49	Q96NF6	230 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	FBN2	P35556	2912 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659		B5MCH6	92 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	PSMB2	P49721	201 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	MFAP4	P55083	255 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	LAGE3	Q14657	143 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	TMEM219	Q86XT9	240 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.74	□□□□□ -0.53
BBS1-225	ENST00000630659	CHD6	Q8TD26	2715 aa		11.74	□□□□□ -0.53
BBS1-225	ENST00000630659		J3QLI3	93 aa		11.73	□□□□□ -0.53
BBS1-225	ENST00000630659	ATP6V0E1	O15342	81 aa		11.73	□□□□□ -0.53
BBS1-225	ENST00000630659	IGKV1-17	P01599	117 aa		11.73	□□□□□ -0.53
BBS1-225	ENST00000630659	PPIF	P30405	207 aa	Known RBP	11.73	□□□□□ -0.53
BBS1-225	ENST00000630659	GLMP	Q8WWB7	406 aa		11.73	□□□□□ -0.53
BBS1-225	ENST00000630659	CARD19	Q96LW7	228 aa		11.73	□□□□□ -0.53
BBS1-225	ENST00000630659	IGLV2-18	A0A075B6J9	118 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	RNF223	E7ERA6	249 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE2B	Q13066	116 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	ECSCR	Q19T08	205 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE2E	Q4V326	116 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659		Q71RC1	249 aa	Predicted RBP	11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	GAGE2D	Q9UEU5	116 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	TMSB15B	A0A087X1C1	80 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	MRPS12	O15235	138 aa	Known RBP	11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	SNCG	O76070	127 aa		11.72	□□□□□ -0.53
BBS1-225	ENST00000630659	TGFA	P01135	160 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	NDUFV3	P56181	108 aa	Known RBP	11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	PTPN13	Q12923	2485 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	KLK9	Q2XQG4	91 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	MAPK1IP1L	Q8NDC0	245 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	PRR25	Q96S07	402 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	C21orf62	Q9NYP8	219 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	KLK9	Q9UKQ9	250 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659		S4R3C0	116 aa		11.71	□□□□□ -0.53
BBS1-225	ENST00000630659	ABCA1	O95477	2261 aa		11.71	□□□□□ -0.54
BBS1-225	ENST00000630659	LOC107984156	A0A0G2JMH3	177 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659		A6NDX4	124 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	LINC01549	A6NIU2	74 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	LINC01548	A6NM66	108 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659		K7EMI3	77 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	RPL32	P62910	135 aa	Known RBP	11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	ARL17A	Q8IVW1	177 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.7	□□□□□ -0.54	5e-7	■■■■□ 22
BBS1-225	ENST00000630659	POLQ	O75417	2590 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659		H3BUX3	64 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	LGALS1	P09382	135 aa	Known RBP	11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	IFITM1	P13164	125 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	LY6E	Q16553	131 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	SHISA2	Q6UWI4	295 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	AGRN	O00468	2067 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	CENPE	Q02224	2701 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	VPS13C	Q709C8	3753 aa		11.7	□□□□□ -0.54
BBS1-225	ENST00000630659	FABP5P3	A8MUU1	101 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659		F8W735	103 aa	Predicted RBP	11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	NHLRC4	P0CG21	123 aa	Predicted RBP	11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	SCGB1C2	P0DMR2	95 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	IGHV4-31	P0DP07	118 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	HERV-K104	P63124	156 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	TTC32	Q5I0X7	151 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	TMEM78	Q5T7P6	136 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659	PSMG3-AS1	Q96PY0	264 aa		11.69	□□□□□ -0.54
BBS1-225	ENST00000630659		G3V318	75 aa		11.68	□□□□□ -0.54
BBS1-225	ENST00000630659	IL17REL	Q6ZVW7	336 aa		11.68	□□□□□ -0.54
BBS1-225	ENST00000630659	RNF125	Q96EQ8	232 aa		11.68	□□□□□ -0.54
BBS1-225	ENST00000630659	CELSR2	Q9HCU4	2923 aa		11.68	□□□□□ -0.54
BBS1-225	ENST00000630659	SCGB2A1	O75556	95 aa		11.68	□□□□□ -0.54
BBS1-225	ENST00000630659	ZNF491	Q8N8L2	437 aa		11.68	□□□□□ -0.54
BBS1-225	ENST00000630659	IGHV3-23	P01764	117 aa		11.67	□□□□□ -0.54
BBS1-225	ENST00000630659	CRIP2	P52943	208 aa	Predicted RBP	11.67	□□□□□ -0.54
BBS1-225	ENST00000630659	ORMDL2	Q53FV1	153 aa		11.67	□□□□□ -0.54
BBS1-225	ENST00000630659		Q96MF0	132 aa		11.67	□□□□□ -0.54
BBS1-225	ENST00000630659	C17orf77	Q96MU5	243 aa		11.67	□□□□□ -0.54
BBS1-225	ENST00000630659	TNFRSF18	Q9Y5U5	241 aa		11.67	□□□□□ -0.54
BBS1-225	ENST00000630659	MAP1A	P78559	2803 aa	Predicted RBP	11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	TRAV41	A0A0B4J266	112 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659		M0R3E3	92 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	ARL3	P36405	182 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	MRPL23	Q16540	153 aa	Known RBP	11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	ANKRD29	Q8N6D5	301 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	LINC01600	Q96MT4	127 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	NAV2	Q8IVL1	2488 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	ABCA12	Q86UK0	2595 aa		11.66	□□□□□ -0.54
BBS1-225	ENST00000630659	CD7	P09564	240 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms