RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 FAM162BQ5T6X4 162 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 TMEM88Q6PEY1 159 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 TEX261Q6UWH6 196 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 COX8CQ7Z4L0 72 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 LINC00476Q8WZB0 136 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 TXNDC17Q9BRA2 123 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 MLST8Q9BVC4 326 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 VAX2Q9UIW0 290 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 APLNQ9ULZ1 77 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 SACSQ9NZJ4 4579 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.79
LINC00550-202ENST00000629570 MUC4Q99102 2169 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 TMSB15BA0A087X1C1 80 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 RAB19A4D1S5 217 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 PGPEP1LA6NFU8 196 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 FABP5P3A8MUU1 101 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 PDE6DO43924 150 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 LY6G6CO95867 125 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 IGLV2-8P01709 118 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 IGHV3-53P01767 116 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 ORM1P02763 201 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 S100A9P06702 114 aaKnown RBP3.89□□□□□ -1.79
LINC00550-202ENST00000629570 SFTA3P0C7M3 94 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 RNASE3P12724 160 aaKnown RBP3.89□□□□□ -1.79
LINC00550-202ENST00000629570 ZNF674Q2M3X9 581 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 LGALS9BQ3B8N2 356 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 TOR2AQ5JU69 321 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 ZNF575Q86XF7 245 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 BAGE2Q86Y30 109 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 KCNS1Q96KK3 526 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 C18orf15Q96N68 181 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 NDUFAF3Q9BU61 184 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 MED9Q9NWA0 146 aa3.89□□□□□ -1.79
LINC00550-202ENST00000629570 TRAV26-1A0A087WT03 109 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 A0A0J9YY99 117 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 GRIFINA4D1Z8 144 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 RBFOX3A6NFN3 312 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 B4DEV8 164 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 KRBOX1C9JBD0 128 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 C9JCJ5 164 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 H3BVH4 76 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 M0R2P5 195 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 MGST1P10620 155 aaKnown RBP3.88□□□□□ -1.79
LINC00550-202ENST00000629570 TAGLN2P37802 199 aaKnown RBP3.88□□□□□ -1.79
LINC00550-202ENST00000629570 ASIPP42127 132 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 GNG4P50150 75 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 CEBPGP53567 150 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 TCTAP57738 103 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 RPL19P84098 196 aaKnown RBP3.88□□□□□ -1.79
LINC00550-202ENST00000629570 OR5I1Q13606 314 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 POM121L12Q8N7R1 296 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 RASL10AQ92737 203 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 ZNF479Q96JC4 524 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 FAM210BQ96KR6 192 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 SPXQ9BT56 116 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 DNAH1Q9P2D7 4330 aa3.88□□□□□ -1.79
LINC00550-202ENST00000629570 C9orf118A6NHY6 69 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 TMEM250H0YL14 139 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 NUDT3O95989 172 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 S100A4P26447 101 aaKnown RBP3.87□□□□□ -1.79
LINC00550-202ENST00000629570 ZNF876PQ49A33 203 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 LGALS9CQ6DKI2 356 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 VSIG2Q96IQ7 327 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 FAM210AQ96ND0 272 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 EIF5A2Q9GZV4 153 aaKnown RBP3.87□□□□□ -1.79
LINC00550-202ENST00000629570 PARLQ9H300 379 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 IL36BQ9NZH7 164 aa3.87□□□□□ -1.79
LINC00550-202ENST00000629570 IGHV3-73A0A0B4J1V6 119 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 TRAV4A0A0B4J268 109 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 C19orf71A6NCJ1 209 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 C9JQL5 133 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 K7EN84 100 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 ARMS2P0C7Q2 107 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 GZMBP10144 247 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 FHL2Q14192 279 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 DNLZQ5SXM8 178 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 CFAP126Q5VTH2 177 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 OR4C5Q8NGB2 326 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 SMIM12Q96EX1 92 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 JPT2Q9H910 190 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
LINC00550-202ENST00000629570 VPS13DQ5THJ4 4388 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 NACAE9PAV3 2078 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 A0A096LPF7 62 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 TRGV4A0A0C4DH28 118 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 MUC21A0A0G2JKD1 596 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 MUC21A0A140T8X8 626 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 M0R381 172 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 RS1O15537 224 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 SRP19P09132 144 aaKnown RBP3.85□□□□□ -1.79
LINC00550-202ENST00000629570 P0DMU3 169 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 FAM231AP0DMU4 169 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 FAM231CP0DMU5 169 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 CRYBA4P53673 196 aa3.85□□□□□ -1.79
LINC00550-202ENST00000629570 UBE2DNLQ8IWF7 75 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms