RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.81
SCN8A-209ENST00000627620 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.81
SCN8A-209ENST00000627620 ZGRF1Q86YA3 2104 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 H3BMG7 143 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 Q6ZSR3 168 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 C5orf38Q86SI9 138 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 Q8N9W7 124 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 PATE2Q6UY27 113 aa9.96□□□□□ -0.82
SCN8A-209ENST00000627620 TRAV12-1A0A0B4J245 112 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 IGHG4P01861 327 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 C12orf74Q32Q52 190 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 C16orf54Q6UWD8 224 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 GYPEP15421 78 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 RNF152Q8N8N0 203 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 C1orf43Q9BWL3 253 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 ZFHX2Q9C0A1 2572 aaPredicted RBP9.95□□□□□ -0.82
SCN8A-209ENST00000627620 BUB3O43684 328 aa9.95□□□□□ -0.82
SCN8A-209ENST00000627620 AMTNQ6UX39 209 aa9.94□□□□□ -0.82
SCN8A-209ENST00000627620 K7EQD1 137 aa9.94□□□□□ -0.82
SCN8A-209ENST00000627620 IGHV4OR15-8A0A075B7B6 117 aa9.94□□□□□ -0.82
SCN8A-209ENST00000627620 A0A087WW49 117 aa9.94□□□□□ -0.82
SCN8A-209ENST00000627620 ATP6V0E2Q8NHE4 81 aa9.94□□□□□ -0.82
SCN8A-209ENST00000627620 MSRB1Q9NZV6 116 aa9.94□□□□□ -0.82
SCN8A-209ENST00000627620 ATP5G1P05496 136 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 NPSP0C0P6 89 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 CFC1BP0CG36 223 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 CFC1P0CG37 223 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
SCN8A-209ENST00000627620 PCP2Q8IVA1 136 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 SEM1Q6ZVN7 128 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 HERV-K104P63124 156 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 ZFP36P26651 326 aaKnown RBP9.93□□□□□ -0.82
SCN8A-209ENST00000627620 MED13Q9UHV7 2174 aa9.93□□□□□ -0.82
SCN8A-209ENST00000627620 DEFB105AQ8NG35 78 aa9.92□□□□□ -0.82
SCN8A-209ENST00000627620 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
SCN8A-209ENST00000627620 IGLV10-54A0A075B6I4 117 aa9.92□□□□□ -0.82
SCN8A-209ENST00000627620 hADV29S1A0JD25 119 aa9.92□□□□□ -0.82
SCN8A-209ENST00000627620 DAZAP2Q15038 168 aaPredicted RBP9.92□□□□□ -0.82
SCN8A-209ENST00000627620 A0A1W2PNU3 283 aaPredicted RBP9.92□□□□□ -0.82
SCN8A-209ENST00000627620 EML6Q6ZMW3 1958 aa9.92□□□□□ -0.82
SCN8A-209ENST00000627620 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
SCN8A-209ENST00000627620 TEX48A0A1B0GUV7 120 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 ZFP2Q6ZN57 461 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 PCNX2A6NKB5 2137 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-209ENST00000627620 FAM208BQ5VWN6 2430 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 WI2-2373I1.2A0A1W2PRP0 233 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 Q8N7P7 452 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-209ENST00000627620 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 ESM1Q9NQ30 184 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 C2orf70A6NJV1 201 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 IGHV3-33P01772 117 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 TEX22C9J3V5 150 aa9.91□□□□□ -0.82
SCN8A-209ENST00000627620 DAZ2Q13117 558 aaKnown RBP9.91□□□□□ -0.82
SCN8A-209ENST00000627620 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
SCN8A-209ENST00000627620 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
SCN8A-209ENST00000627620 LYPD6Q86Y78 171 aa9.9□□□□□ -0.82
SCN8A-209ENST00000627620 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.82
SCN8A-209ENST00000627620 IGHV4-4A0A075B6R2 117 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 A0A0J9YXV3 536 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 PRSS47A8MTI9 375 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 IGLV1-47P01700 117 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 BAALC-AS2P0C853 105 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 CCL18P55774 89 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 Q8N1Y9 231 aa9.9□□□□□ -0.83
SCN8A-209ENST00000627620 FAM167A-AS1Q96KT0 104 aa9.89□□□□□ -0.83
SCN8A-209ENST00000627620 SPRY4Q9C004 299 aa9.89□□□□□ -0.83
SCN8A-209ENST00000627620 IFITM1P13164 125 aa9.89□□□□□ -0.83
SCN8A-209ENST00000627620 DYSFO75923 2080 aa9.89□□□□□ -0.83
SCN8A-209ENST00000627620 COX7A2LO14548 114 aa9.89□□□□□ -0.83
SCN8A-209ENST00000627620 SH2D6Q7Z4S9 175 aa9.89□□□□□ -0.83
SCN8A-209ENST00000627620 K7EMT4 169 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 ODF3L1Q8IXM7 274 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 ANKRD29Q8N6D5 301 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 ETDCA0A1B0GVM5 59 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 GAGE12HA6NDE8 117 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 CRYBA4P53673 196 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
SCN8A-209ENST00000627620 HIST2H2BCQ6DN03 193 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 LINC00173Q6ZV60 143 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 GPHB5Q86YW7 130 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 E7EUB6 86 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 CCL25O15444 150 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 NDUFS5O43920 106 aa9.87□□□□□ -0.83
SCN8A-209ENST00000627620 RS1O15537 224 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 WISP2O76076 250 aa9.86□□□□□ -0.83
SCN8A-209ENST00000627620 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms