RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ATP5G1P05496 136 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 CXCL1P09341 107 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 SFTA3P0C7M3 94 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
PNKP-221ENST00000627317 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 DNLZQ5SXM8 178 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 LINC01551Q86U37 167 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 COMMD7Q86VX2 200 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 IL36BQ9NZH7 164 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 NAT8Q9UHE5 227 aa10.42□□□□□ -0.74
PNKP-221ENST00000627317 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
PNKP-221ENST00000627317 ADIRFQ15847 76 aa10.41□□□□□ -0.74
PNKP-221ENST00000627317 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
PNKP-221ENST00000627317 UQCC3Q6UW78 93 aa10.41□□□□□ -0.74
PNKP-221ENST00000627317 NUDT10Q8NFP7 164 aa10.41□□□□□ -0.74
PNKP-221ENST00000627317 NUDT11Q96G61 164 aa10.41□□□□□ -0.74
PNKP-221ENST00000627317 RNASE7Q9H1E1 156 aaKnown RBP10.41□□□□□ -0.74
PNKP-221ENST00000627317 RPP21Q9H633 154 aaKnown RBP10.41□□□□□ -0.74
PNKP-221ENST00000627317 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
PNKP-221ENST00000627317 MED14OSP0DP75 135 aa10.4□□□□□ -0.74
PNKP-221ENST00000627317 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
PNKP-221ENST00000627317 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
PNKP-221ENST00000627317 RASL10AQ92737 203 aa10.4□□□□□ -0.74
PNKP-221ENST00000627317 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
PNKP-221ENST00000627317 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
PNKP-221ENST00000627317 F5H768 121 aa10.39□□□□□ -0.75
PNKP-221ENST00000627317 GATCO43716 136 aaKnown RBP10.39□□□□□ -0.75
PNKP-221ENST00000627317 RPL23P62829 140 aaKnown RBP10.39□□□□□ -0.75
PNKP-221ENST00000627317 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
PNKP-221ENST00000627317 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
PNKP-221ENST00000627317 KMT2AQ03164 3969 aa10.39□□□□□ -0.75
PNKP-221ENST00000627317 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
PNKP-221ENST00000627317 GZMBP10144 247 aa10.38□□□□□ -0.75
PNKP-221ENST00000627317 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
PNKP-221ENST00000627317 PTH2Q96A98 100 aa10.38□□□□□ -0.75
PNKP-221ENST00000627317 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
PNKP-221ENST00000627317 TPPP3Q9BW30 176 aa10.38□□□□□ -0.75
PNKP-221ENST00000627317 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 IGLL5B9A064 214 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 M0R381 172 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 FER1L6-AS1Q8NA97 138 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 ISOC2Q96AB3 205 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 MUC4Q99102 2169 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
PNKP-221ENST00000627317 SNAI2O43623 268 aa10.36□□□□□ -0.75
PNKP-221ENST00000627317 OR5AL1P0C617 328 aa10.36□□□□□ -0.75
PNKP-221ENST00000627317 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
PNKP-221ENST00000627317 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
PNKP-221ENST00000627317 SFRP2Q96HF1 295 aa10.36□□□□□ -0.75
PNKP-221ENST00000627317 OSTCQ9NRP0 149 aa10.36□□□□□ -0.75
PNKP-221ENST00000627317 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 CT83Q5H943 113 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 SPANXN1Q5VSR9 72 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 FAM210BQ96KR6 192 aa10.35□□□□□ -0.75
PNKP-221ENST00000627317 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 MUC21A0A0G2JKD1 596 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 MUC21A0A140T8X8 626 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 A8MWL6 223 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 A8MWV9 139 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 F8W036 122 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 RS1O15537 224 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 LY6G6CO95867 125 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 HOXA5P20719 270 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 PNRC1Q12796 327 aaPredicted RBP10.34□□□□□ -0.75
PNKP-221ENST00000627317 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 OR10G8Q8NGN5 311 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
PNKP-221ENST00000627317 SSBP4Q9BWG4 385 aaPredicted RBP10.34□□□□□ -0.75
PNKP-221ENST00000627317 F2Z2F3 143 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 NXPH4O95158 308 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 CTRLP40313 264 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 SSTP61278 116 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 LGALS9CQ6DKI2 356 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
PNKP-221ENST00000627317 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 TCTAP57738 103 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 CACNG7P62955 275 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 SLAQ13239 276 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 LYZL1Q6UWQ5 148 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 V9GYV3 84 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 BIRC6Q9NR09 4857 aa10.32□□□□□ -0.76
PNKP-221ENST00000627317 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 A0A0J9YY99 117 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 RHODO00212 210 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 CIDEAO60543 219 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 FHL2Q14192 279 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
PNKP-221ENST00000627317 TSKUQ8WUA8 353 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms