RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 CACNG7P62955 275 aa14.64□□□□□ -0.07
CHRNA4-209ENST00000627000 TRAV12-3A0A0B4J271 114 aa14.64□□□□□ -0.07
CHRNA4-209ENST00000627000 ORAOV1Q8WV07 137 aa14.64□□□□□ -0.07
CHRNA4-209ENST00000627000 TMEM70Q9BUB7 260 aa14.64□□□□□ -0.07
CHRNA4-209ENST00000627000 LAMTOR2Q9Y2Q5 125 aa14.64□□□□□ -0.07
CHRNA4-209ENST00000627000 A0A096LNJ9 63 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 A0A1W2PRX2 142 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 M0R381 172 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 FXYD7P58549 80 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 TCF21O43680 179 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 CD28P10747 220 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 RNASE3P12724 160 aaKnown RBP14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 MRPS16Q9Y3D3 137 aaKnown RBP14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 MTORP42345 2549 aa14.63□□□□□ -0.07
CHRNA4-209ENST00000627000 TRAV26-2A0A0B4J265 109 aa14.62□□□□□ -0.07
CHRNA4-209ENST00000627000 PPBPP02775 128 aa14.62□□□□□ -0.07
CHRNA4-209ENST00000627000 MAJINQ3KP22 176 aa14.62□□□□□ -0.07
CHRNA4-209ENST00000627000 PEMTQ9UBM1 199 aa14.62□□□□□ -0.07
CHRNA4-209ENST00000627000 SYS1-DBNDD2H3BUS1 97 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 TNFRSF6BO95407 300 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 SMIM15Q7Z3B0 74 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 TMEM61Q8N0U2 210 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 RNASE1P07998 156 aaKnown RBP14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 RAX2Q96IS3 184 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 SCRT2Q9NQ03 307 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 PHLDA3Q9Y5J5 127 aa14.61□□□□□ -0.07
CHRNA4-209ENST00000627000 C7orf71A4D174 169 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 LEPP41159 167 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 SPINK13Q1W4C9 94 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 LINC01006Q8NI28 216 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 MCRIP2Q9BUT9 160 aaKnown RBP14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 MUC4Q99102 2169 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 FAM159AQ6UWV7 190 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 ODF3Q96PU9 254 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 MAP1LC3AQ9H492 121 aa14.6□□□□□ -0.07
CHRNA4-209ENST00000627000 KNCNA6PVL3 124 aa14.59□□□□□ -0.07
CHRNA4-209ENST00000627000 CRXO43186 299 aaPredicted RBP14.59□□□□□ -0.07
CHRNA4-209ENST00000627000 H0Y8G0 127 aa14.58□□□□□ -0.07
CHRNA4-209ENST00000627000 DEFB131AP59861 70 aa14.58□□□□□ -0.07
CHRNA4-209ENST00000627000 FOXI2Q6ZQN5 318 aa14.58□□□□□ -0.07
CHRNA4-209ENST00000627000 ZNF747Q9BV97 191 aa14.58□□□□□ -0.07
CHRNA4-209ENST00000627000 HSPB8Q9UJY1 196 aa14.58□□□□□ -0.07
CHRNA4-209ENST00000627000 MED14OSP0DP75 135 aa14.58□□□□□ -0.08
CHRNA4-209ENST00000627000 CITED2Q99967 270 aaPredicted RBP14.58□□□□□ -0.08
CHRNA4-209ENST00000627000 MAP1LC3CQ9BXW4 147 aa14.58□□□□□ -0.08
CHRNA4-209ENST00000627000 TRAV9-2A0A087WT02 112 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 CDKN1BP46527 198 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 AMTNQ6UX39 209 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 C14orf178Q8N769 122 aaPredicted RBP14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 OR2K2Q8NGT1 345 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 DYNLRB2Q8TF09 96 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 DUSP14O95147 198 aaKnown RBP14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 CD7P09564 240 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 TSPOP30536 169 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 STPG4Q8N801 248 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 NRACQ8N912 160 aa14.57□□□□□ -0.08
CHRNA4-209ENST00000627000 DEFB114Q30KQ6 69 aa14.56□□□□□ -0.08
CHRNA4-209ENST00000627000 PTTG1IPP53801 180 aa14.56□□□□□ -0.08
CHRNA4-209ENST00000627000 C16orf95Q9H693 158 aa14.56□□□□□ -0.08
CHRNA4-209ENST00000627000 WNK1Q9H4A3 2382 aa14.55□□□□□ -0.08
CHRNA4-209ENST00000627000 OR4C46A6NHA9 309 aa14.55□□□□□ -0.08
CHRNA4-209ENST00000627000 CD300EQ496F6 205 aaPredicted RBP14.55□□□□□ -0.08
CHRNA4-209ENST00000627000 ZNF418Q8TF45 676 aaPredicted RBP14.55□□□□□ -0.08
CHRNA4-209ENST00000627000 PMCHL2Q9BQD1 86 aa14.55□□□□□ -0.08
CHRNA4-209ENST00000627000 CCL24O00175 119 aa14.54□□□□□ -0.08
CHRNA4-209ENST00000627000 HBDP02042 147 aa14.54□□□□□ -0.08
CHRNA4-209ENST00000627000 HILS1P60008 231 aa14.54□□□□□ -0.08
CHRNA4-209ENST00000627000 FHL3Q13643 280 aa14.54□□□□□ -0.08
CHRNA4-209ENST00000627000 LY6G6DO95868 133 aa14.54□□□□□ -0.08
CHRNA4-209ENST00000627000 PET117Q6UWS5 81 aa14.54□□□□□ -0.08
CHRNA4-209ENST00000627000 IGLV2-18A0A075B6J9 118 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 SCGB2A2Q13296 93 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 DPH3P1Q9H4G8 78 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 NXT2Q9NPJ8 142 aaKnown RBP14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 TMEM160Q9NX00 188 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 SETD2Q9BYW2 2564 aaPredicted RBP14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 LINC01546A6NGU7 62 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 MDFICQ9P1T7 246 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 COX11Q9Y6N1 276 aa14.53□□□□□ -0.08
CHRNA4-209ENST00000627000 TRAV2A0A0B4J234 112 aa14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 RBMY1BA6NDE4 496 aaKnown RBP14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 RBMY1EA6NEQ0 496 aaKnown RBP14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 NXPH4O95158 308 aa14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 RBMY1DP0C7P1 496 aaKnown RBP14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 MRAP2Q96G30 205 aa14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 JPT2Q9H910 190 aa14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 MAP6D1Q9H9H5 199 aa14.52□□□□□ -0.08
CHRNA4-209ENST00000627000 IGHV3-16A0A0C4DH30 117 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 MGPP08493 103 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 RBMY1A1P0DJD3 496 aaKnown RBP14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 RBMY1CP0DJD4 496 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 HLA-DRB4P13762 266 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 IGLL1P15814 213 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 PCP4P48539 62 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 UBE2V1Q13404 147 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 RBMY1FQ15415 496 aaKnown RBP14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 Q8N1Y9 231 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 Q8N8P6 123 aa14.51□□□□□ -0.09
CHRNA4-209ENST00000627000 TSSC4Q9Y5U2 329 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms