RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 RGPD1P0DJD0 1748 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 ACACAQ13085 2346 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 KIDINS220Q9ULH0 1771 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 ODAMA1E959 279 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 MFSD11O43934 449 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 CCL4P13236 92 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 MSMO1Q15800 293 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 KRTAP19-6Q3LI70 58 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 FOXI2Q6ZQN5 318 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 LYG2Q86SG7 212 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 OR4B1Q8NGF8 309 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 EFCAB11Q9BUY7 163 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 BIN3Q9NQY0 253 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 TPRKBQ9Y3C4 175 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 LRP2P98164 4655 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 FGD6Q6ZV73 1430 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 KDM5DQ9BY66 1539 aa0.53□□□□□ -2.33
CDKL5-207ENST00000624700 USP54Q70EL1 1684 aa0.53□□□□□ -2.33
CDKL5-207ENST00000624700 ATG2AQ2TAZ0 1938 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 ANK2Q01484 3957 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 KNTC1P50748 2209 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 A0A0D9SG42 100 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 A0A0J9YY99 117 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 ZNF727A8MUV8 499 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 CSN2P05814 226 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 CD14P08571 375 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 ZNF137PP52743 207 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 MRPS36P82909 103 aaKnown RBP0.52□□□□□ -2.33
CDKL5-207ENST00000624700 VMA21Q3ZAQ7 101 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 ASB4Q9Y574 426 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 TARBP1Q13395 1621 aaKnown RBP0.52□□□□□ -2.33
CDKL5-207ENST00000624700 SHROOM2Q13796 1616 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 USP32Q8NFA0 1604 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 SHPRHQ149N8 1683 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 ALMS1Q8TCU4 4167 aa0.52□□□□□ -2.33
CDKL5-207ENST00000624700 KPNA4O00629 521 aaPredicted RBP0.51□□□□□ -2.33
CDKL5-207ENST00000624700 ANK1P16157 1881 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 SPINT3P49223 89 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 TAS2R41P59536 307 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 MIR22HGQ0VDD5 57 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 PAPPAQ13219 1627 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 DIAPH2-AS1Q14236 149 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 OCIAD2Q56VL3 154 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 PRR15Q8IV56 129 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 C10orf111Q8N326 155 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 CMYA5Q8N3K9 4069 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 STX19Q8N4C7 294 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 SMIM20Q8N5G0 67 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 GRPEL2Q8TAA5 225 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 OR4C12Q96R67 309 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 UNC13AQ9UPW8 1703 aa0.51□□□□□ -2.33
CDKL5-207ENST00000624700 NRXN3Q9Y4C0 1643 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 ADAMTS12P58397 1594 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 TTC37Q6PGP7 1564 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 TEX14Q8IWB6 1497 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 A6NN06 94 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 PFDN1O60925 122 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 MT-ND6P03923 174 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 FABP4P15090 132 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 PDE6GP18545 87 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 ISOC1Q96CN7 298 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 AP1S3Q96PC3 154 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 BOLA2Q9H3K6 86 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 NUBP2Q9Y5Y2 271 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 STARD9Q9P2P6 4700 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 DYNC1H1Q14204 4646 aaKnown RBP0.5□□□□□ -2.33
CDKL5-207ENST00000624700 SPHKAPQ2M3C7 1700 aa0.5□□□□□ -2.33
CDKL5-207ENST00000624700 TECPR2O15040 1411 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 NUPR2A6NF83 97 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 SERPINB1P30740 379 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 RPL37AP61513 92 aaKnown RBP0.49□□□□□ -2.33
CDKL5-207ENST00000624700 CASC2Q6XLA1 102 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 FAM24BQ8N5W8 94 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 C5orf17Q8NAS9 161 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 OR5AK2Q8NH90 309 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 BORCS8Q96FH0 119 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 LRRC37A2A6NM11 1700 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 TNRC6CQ9HCJ0 1690 aaKnown RBP0.49□□□□□ -2.33
CDKL5-207ENST00000624700 PEG3Q9GZU2 1588 aa0.49□□□□□ -2.33
CDKL5-207ENST00000624700 ASXL1Q8IXJ9 1541 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 ABCC5O15440 1437 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 E5RI56 91 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 PPP5D1E7EU14 171 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 PRH1P02810 166 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 KDELR1P24390 212 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 MT4P47944 62 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 SPINK7P58062 85 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 FXYD4P59646 89 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 LTC4SQ16873 150 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 C6orf52Q5T4I8 152 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 C3orf33Q6P1S2 294 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 LINC00269Q8N2A0 174 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 CCL4L1Q8NHW4 92 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 SMR3AQ99954 134 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 UFC1Q9Y3C8 167 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 UGGT1Q9NYU2 1555 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 DNAH9Q9NYC9 4486 aa0.48□□□□□ -2.33
CDKL5-207ENST00000624700 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.47□□□□□ -2.33
CDKL5-207ENST00000624700 CROCC2H7BZ55 1655 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms