RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 IFNA1P01562 189 aa13.17□□□□□ -0.3
LINC01006-208ENST00000624071 RPL35P42766 123 aaKnown RBP13.17□□□□□ -0.3
LINC01006-208ENST00000624071 C11orf52Q96A22 123 aa13.17□□□□□ -0.3
LINC01006-208ENST00000624071 MUC4Q99102 2169 aa13.17□□□□□ -0.3
LINC01006-208ENST00000624071 RS1O15537 224 aa13.16□□□□□ -0.3
LINC01006-208ENST00000624071 CFAP126Q5VTH2 177 aa13.16□□□□□ -0.3
LINC01006-208ENST00000624071 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
LINC01006-208ENST00000624071 Q6ZR54 194 aa13.16□□□□□ -0.3
LINC01006-208ENST00000624071 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
LINC01006-208ENST00000624071 ARMS2P0C7Q2 107 aa13.15□□□□□ -0.3
LINC01006-208ENST00000624071 BCL2P10415 239 aa13.15□□□□□ -0.3
LINC01006-208ENST00000624071 GYPEP15421 78 aa13.15□□□□□ -0.3
LINC01006-208ENST00000624071 MEF2BQ02080 365 aaPredicted RBP13.15□□□□□ -0.3
LINC01006-208ENST00000624071 LOC100131303A0A0U1RQF7 123 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 RAB19A4D1S5 217 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 RPL19P84098 196 aaKnown RBP13.14□□□□□ -0.31
LINC01006-208ENST00000624071 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
LINC01006-208ENST00000624071 LINC01559Q495D7 138 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 PCNPQ8WW12 178 aaKnown RBP13.14□□□□□ -0.31
LINC01006-208ENST00000624071 PTH2Q96A98 100 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 TXNDC17Q9BRA2 123 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 IL36BQ9NZH7 164 aa13.14□□□□□ -0.31
LINC01006-208ENST00000624071 K7EQD1 137 aa13.13□□□□□ -0.31
LINC01006-208ENST00000624071 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
LINC01006-208ENST00000624071 CENPWQ5EE01 88 aa13.13□□□□□ -0.31
LINC01006-208ENST00000624071 Q9H8V8 135 aa13.13□□□□□ -0.31
LINC01006-208ENST00000624071 JPT2Q9H910 190 aa13.13□□□□□ -0.31
LINC01006-208ENST00000624071 MED9Q9NWA0 146 aa13.13□□□□□ -0.31
LINC01006-208ENST00000624071 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
LINC01006-208ENST00000624071 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
LINC01006-208ENST00000624071 NBDYA0A0U1RRE5 68 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 PDE6DO43924 150 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 SRIP30626 198 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 DNLZQ5SXM8 178 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 DMRTA1Q5VZB9 504 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
LINC01006-208ENST00000624071 RTL8CO15255 209 aa13.11□□□□□ -0.31
LINC01006-208ENST00000624071 MGST1P10620 155 aaKnown RBP13.11□□□□□ -0.31
LINC01006-208ENST00000624071 NEGR1Q7Z3B1 354 aa13.11□□□□□ -0.31
LINC01006-208ENST00000624071 GNG4P50150 75 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 SLC25A29Q8N8R3 303 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 SAMD10Q9BYL1 202 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 PARLQ9H300 379 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 PHLDA3Q9Y5J5 127 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 BIRC6Q9NR09 4857 aa13.1□□□□□ -0.31
LINC01006-208ENST00000624071 A8MWV9 139 aa13.09□□□□□ -0.31
LINC01006-208ENST00000624071 M0R381 172 aa13.09□□□□□ -0.31
LINC01006-208ENST00000624071 C1orf134Q5TEV5 83 aa13.09□□□□□ -0.31
LINC01006-208ENST00000624071 Q6ZSN1 163 aa13.09□□□□□ -0.31
LINC01006-208ENST00000624071 SCRT2Q9NQ03 307 aa13.09□□□□□ -0.31
LINC01006-208ENST00000624071 DNAH2Q9P225 4427 aa13.09□□□□□ -0.31
LINC01006-208ENST00000624071 CIDEAO60543 219 aa13.08□□□□□ -0.32
LINC01006-208ENST00000624071 NXPH4O95158 308 aa13.08□□□□□ -0.32
LINC01006-208ENST00000624071 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
LINC01006-208ENST00000624071 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.32
LINC01006-208ENST00000624071 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
LINC01006-208ENST00000624071 PRADC1Q9BSG0 188 aa13.07□□□□□ -0.32
LINC01006-208ENST00000624071 TRBV20OR9-2A0A075B6H5 130 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 TRBV6-4A0A1B0GX49 114 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 RBFOX3A6NFN3 312 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 PRSS29PA6NIE9 313 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 RHOHQ15669 191 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 LINC00336Q6ZUF6 198 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 KRTAP1-5Q9BYS1 174 aa13.06□□□□□ -0.32
LINC01006-208ENST00000624071 A0A087WWL8 130 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 SSTP61278 116 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 ZFP2Q6ZN57 461 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 ZFP82Q8N141 532 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 OR10AG1Q8NH19 301 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
LINC01006-208ENST00000624071 DAZAP1Q96EP5 407 aaKnown RBP13.05□□□□□ -0.32
LINC01006-208ENST00000624071 SIVA1O15304 175 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 MED14OSP0DP75 135 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 GZMBP10144 247 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 UFSP1Q6NVU6 142 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 OR2D3Q8NGH3 330 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 SFRP2Q96HF1 295 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 FRAS1Q86XX4 4008 aa13.04□□□□□ -0.32
LINC01006-208ENST00000624071 CXCL1P09341 107 aa13.03□□□□□ -0.32
LINC01006-208ENST00000624071 CEBPGP53567 150 aa13.03□□□□□ -0.32
LINC01006-208ENST00000624071 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
LINC01006-208ENST00000624071 TOR2AQ5JU69 321 aa13.03□□□□□ -0.32
LINC01006-208ENST00000624071 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
LINC01006-208ENST00000624071 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
LINC01006-208ENST00000624071 Q9UF83 564 aa13.03□□□□□ -0.32
LINC01006-208ENST00000624071 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.33
LINC01006-208ENST00000624071 GAGE12JA6NER3 117 aa13.02□□□□□ -0.33
LINC01006-208ENST00000624071 CRYGDP07320 174 aa13.02□□□□□ -0.33
LINC01006-208ENST00000624071 GAGE1Q13065 139 aa13.02□□□□□ -0.33
LINC01006-208ENST00000624071 GAGE4Q13068 117 aa13.02□□□□□ -0.33
LINC01006-208ENST00000624071 GAGE5Q13069 117 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms