RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 EPDR1Q9UM22 224 aa6.05□□□□□ -1.44
PCDHB9-202ENST00000623266 TRAV8-6A0A0B4J262 113 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 FAM229AH3BQW9 127 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 GCHFRP30047 84 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 CDC34P49427 236 aaPredicted RBP6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 C5orf17Q8NAS9 161 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 ATP6V0E2Q8NHE4 81 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 TMEM70Q9BUB7 260 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 SAMD10Q9BYL1 202 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
PCDHB9-202ENST00000623266 TRAV34A0A0B4J273 112 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 GGTLC3B5MD39 225 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 PSCAO43653 123 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 PET100P0DJ07 73 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 LINC00694P0DN24 101 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 CRIP1P50238 77 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 PPT1P50897 306 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 FLI1Q01543 452 aaPredicted RBP6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 RHOHQ15669 191 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 SMUG1Q53HV7 270 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 UFSP1Q6NVU6 142 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 DAZ4Q86SG3 579 aaKnown RBP6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 PRNTQ86SH4 94 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 HSD17B11Q8NBQ5 300 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 NTN5Q8WTR8 489 aaPredicted RBP6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 DNAJC30Q96LL9 226 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 PRADC1Q9BSG0 188 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 DAZ3Q9NR90 486 aaKnown RBP6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 ALG5Q9Y673 324 aa6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 DMBT1Q9UGM3 2413 aaPredicted RBP6.03□□□□□ -1.44
PCDHB9-202ENST00000623266 SERTM2A0A1B0GWG4 89 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 MGST1P10620 155 aaKnown RBP6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 SERF2P84101 59 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 ZNF726P1Q15940 193 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 C14orf178Q8N769 122 aaPredicted RBP6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 OR2T35Q8NGX2 323 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 AQP10Q96PS8 301 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 PSMG3Q9BT73 122 aaPredicted RBP6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 SH3BGRL3Q9H299 93 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 PARLQ9H300 379 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 TNFSF18Q9UNG2 199 aa6.02□□□□□ -1.45
PCDHB9-202ENST00000623266 GAGE12JA6NER3 117 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 FABP5P3A8MUU1 101 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 C1QBP02746 253 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 GAGE1Q13065 139 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 GAGE4Q13068 117 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 GAGE5Q13069 117 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 GAGE13Q4V321 117 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 SAPCD1Q5SSQ6 148 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 ZFP2Q6ZN57 461 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 Q6ZSA8 131 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 NDFIP1Q9BT67 221 aa6.01□□□□□ -1.45
PCDHB9-202ENST00000623266 A0A1W2PRE2 83 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 K7EQM0 130 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 LECT2O14960 151 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 CXorf1O96002 111 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 DEFA1P59665 94 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 DEFA3P59666 94 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 LAGE3Q14657 143 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 LINC01620Q4KN68 170 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 PIK3CD-AS1Q5SR53 167 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 DNLZQ5SXM8 178 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 RPL7L1Q6DKI1 246 aaKnown RBP6□□□□□ -1.45
PCDHB9-202ENST00000623266 CYB561D1Q8N8Q1 229 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 BAALCQ8WXS3 180 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 ACTR3CQ9C0K3 210 aaPredicted RBP6□□□□□ -1.45
PCDHB9-202ENST00000623266 TMEM167BQ9NRX6 74 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 ARL2-SNX15V9GYD0 113 aa6□□□□□ -1.45
PCDHB9-202ENST00000623266 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 RNF222A6NCQ9 220 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 A8MWV9 139 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 KRBOX1C9JBD0 128 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 MBP02144 154 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 ARMS2P0C7Q2 107 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 LGALSLQ3ZCW2 172 aaPredicted RBP5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 COX8CQ7Z4L0 72 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 TM2D2Q9BX73 214 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
PCDHB9-202ENST00000623266 TRAV8-3A0A0A6YYJ7 113 aa5.98□□□□□ -1.45
PCDHB9-202ENST00000623266 GRIFINA4D1Z8 144 aa5.98□□□□□ -1.45
PCDHB9-202ENST00000623266 ZC2HC1AQ96GY0 325 aa5.98□□□□□ -1.45
PCDHB9-202ENST00000623266 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 FAM74A7A6NL05 159 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 B4DEV8 164 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 S100A4P26447 101 aaKnown RBP5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 FGF8P55075 233 aaPredicted RBP5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 UBE2G2P60604 165 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 ZFP69Q49AA0 526 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 NIT1Q86X76 327 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 SFRP2Q96HF1 295 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 MED28Q9H204 178 aa5.97□□□□□ -1.45
PCDHB9-202ENST00000623266 A0A087WWC5 75 aa5.96□□□□□ -1.46
PCDHB9-202ENST00000623266 CTXND1A0A1B0GTU2 59 aa5.96□□□□□ -1.46
PCDHB9-202ENST00000623266 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
PCDHB9-202ENST00000623266 G3V3Q6 166 aa5.96□□□□□ -1.46
PCDHB9-202ENST00000623266 H3BVH4 76 aa5.96□□□□□ -1.46
PCDHB9-202ENST00000623266 M0R036 132 aa5.96□□□□□ -1.46
PCDHB9-202ENST00000623266 PEX7O00628 323 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms