RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	GPX1	P07203	203 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	SRP19	P09132	144 aa	Known RBP	4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	TSPO	P30536	169 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	AKR1C3	P42330	323 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	CSN1S1	P47710	185 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	PTTG1IP	P53801	180 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	CCL18	P55774	89 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	KRTAP10-2	P60368	255 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	RPL19	P84098	196 aa	Known RBP	4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	ANXA2R	Q3ZCQ2	193 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	CENPW	Q5EE01	88 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	TMEM256	Q8N2U0	113 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	HIST1H2BA	Q96A08	127 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	C16orf74	Q96GX8	76 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	LINC00467	Q9BRT7	94 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	NOP10	Q9NPE3	64 aa	Known RBP	4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	GSN-AS1	Q9NRJ2	163 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	VAX2	Q9UIW0	290 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	LENEP	Q9Y5L5	61 aa		4.11	□□□□□ -1.75
LINC00963-215	ENST00000622972	IGHV1OR15-1	A0A075B7D0	117 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972		A0A1B0GVY2	172 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	SERTM2	A0A1B0GWG4	89 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	C19orf71	A6NCJ1	209 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	CBY3	A6NI87	242 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	SNURFL	B1AK76	121 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972		H7BYZ3	331 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	SH2D1A	O60880	128 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	RNASE3	P12724	160 aa	Known RBP	4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	FAM3B	P58499	235 aa	Predicted RBP	4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	TAS2R60	P59551	318 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	BLOC1S1	P78537	153 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	OR5I1	Q13606	314 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	ZNF674	Q2M3X9	581 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	TDRG1	Q3Y452	100 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972		Q6ZTI0	123 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	TMEM183A	Q8IXX5	376 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	TMEM263	Q8WUH6	116 aa	Known RBP	4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	FMC1	Q96HJ9	113 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	C20orf144	Q9BQM9	153 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	C1orf43	Q9BWL3	253 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	PARL	Q9H300	379 aa		4.1	□□□□□ -1.75
LINC00963-215	ENST00000622972	KRBOX1	C9JBD0	128 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972		M0R036	132 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	SPINK4	O60575	86 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	GAGE7	O76087	117 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	PFN1	P07737	140 aa	Known RBP	4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	GAGE12F	P0CL80	117 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	GAGE12G	P0CL81	117 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	GAGE12I	P0CL82	117 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	ADCYAP1	P18509	176 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	TCL1A	P56279	114 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	CLLU1	Q5K131	121 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	ZNF493	Q6ZR52	646 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972		Q6ZR54	194 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	EIF4E3	Q8N5X7	224 aa	Known RBP	4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	C9orf85	Q96MD7	179 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	PYGO2	Q9BRQ0	406 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	TCEAL7	Q9BRU2	100 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	NKX6-2	Q9C056	277 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	MRPL16	Q9NX20	251 aa	Known RBP	4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	NAGK	Q9UJ70	344 aa		4.09	□□□□□ -1.75
LINC00963-215	ENST00000622972	FAT2	Q9NYQ8	4349 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	DNAH11	Q96DT5	4516 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	TMSB15B	A0A087X1C1	80 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	TRAV21	A0A0B4J279	112 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972		A0A0J9YY99	117 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	NBDY	A0A0U1RRE5	68 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	GRIFIN	A4D1Z8	144 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	C16orf90	A8MZG2	172 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	TMEM250	H0YL14	139 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	GZMB	P10144	247 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	PPT1	P50897	306 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	SMUG1	Q53HV7	270 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	BAGE2	Q86Y30	109 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	C6orf223	Q8N319	242 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	OCC1	Q8TAD7	63 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	JPT2	Q9H910	190 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	MED9	Q9NWA0	146 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	ZFP30	Q9Y2G7	519 aa		4.08	□□□□□ -1.76
LINC00963-215	ENST00000622972	TRGV2	A0A075B6R0	118 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	TRAV26-1	A0A087WT03	109 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972		C9JCJ5	164 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972		K7EQM0	130 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	PDE6D	O43924	150 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	IFNA1	P01562	189 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	UBE2G1	P62253	170 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	DAZ2	Q13117	558 aa	Known RBP	4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	SAPCD1	Q5SSQ6	148 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	DNLZ	Q5SXM8	178 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	IBA57	Q5T440	356 aa	Known RBP	4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	PRR27	Q6MZM9	219 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	ZNRF2	Q8NHG8	242 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	TXNDC17	Q9BRA2	123 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	RNASE7	Q9H1E1	156 aa	Known RBP	4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	SCRT2	Q9NQ03	307 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972		Q9UF83	564 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	LINC00588	Q9Y4M8	146 aa		4.07	□□□□□ -1.76
LINC00963-215	ENST00000622972	MUC21	A0A0G2JKD1	596 aa		4.06	□□□□□ -1.76
LINC00963-215	ENST00000622972	MUC21	A0A140T8X8	626 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms