RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 DEFB125Q8N687 156 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 PCSK5Q92824 1860 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 TRGV11A0A075B6L2 103 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 IGHV4-30-2A0A087WSY4 118 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 DSCR9P59020 149 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 NRGNQ92686 78 aa9.92□□□□□ -0.82
MSH6-215ENST00000622629 ODF3BA8MYP8 253 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 H3BRM9 83 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 K7ERJ3 54 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 OCIAD2Q56VL3 154 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 SCRT2Q9NQ03 307 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 HIVEP2P31629 2446 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 IGHV7-4-1A0A0J9YVY3 117 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 A4D1N5 150 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 IGHV4-59P01825 116 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
MSH6-215ENST00000622629 CIRBPQ14011 172 aaKnown RBP9.91□□□□□ -0.82
MSH6-215ENST00000622629 F8VRH5 84 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 TRBV12-3P01733 135 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 SLC25A16P16260 332 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 GAGE13Q4V321 117 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 UNQ9165/PRO28630Q6UXU0 137 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 RBAKDNA6NC62 111 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 IGLV2-11P01706 119 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 STHQ8IWL8 128 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
MSH6-215ENST00000622629 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.82
MSH6-215ENST00000622629 TNFRSF13BO14836 293 aaPredicted RBP9.9□□□□□ -0.83
MSH6-215ENST00000622629 CTRLP40313 264 aa9.9□□□□□ -0.83
MSH6-215ENST00000622629 LMO4P61968 165 aa9.9□□□□□ -0.83
MSH6-215ENST00000622629 AJUBAQ96IF1 538 aa9.9□□□□□ -0.83
MSH6-215ENST00000622629 PGPEP1Q9NXJ5 209 aa9.9□□□□□ -0.83
MSH6-215ENST00000622629 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 CCDC140Q96MF4 163 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 SIGMAR1Q99720 223 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 SS18L2Q9UHA2 77 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 K7EMI3 77 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 CRXO43186 299 aaPredicted RBP9.89□□□□□ -0.83
MSH6-215ENST00000622629 DEFB112Q30KQ8 113 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 UBE2E2Q96LR5 201 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
MSH6-215ENST00000622629 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
MSH6-215ENST00000622629 Q71RC1 249 aaPredicted RBP9.88□□□□□ -0.83
MSH6-215ENST00000622629 J3QKU1 62 aa9.88□□□□□ -0.83
MSH6-215ENST00000622629 KLHL30-AS1Q8NEE0 82 aa9.88□□□□□ -0.83
MSH6-215ENST00000622629 PHLDA1Q8WV24 401 aaPredicted RBP9.88□□□□□ -0.83
MSH6-215ENST00000622629 TCTEX1D4Q5JR98 221 aa9.88□□□□□ -0.83
MSH6-215ENST00000622629 NPC2P61916 151 aa9.88□□□□□ -0.83
MSH6-215ENST00000622629 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
MSH6-215ENST00000622629 DSPP15924 2871 aaKnown RBP9.87□□□□□ -0.83
MSH6-215ENST00000622629 IGHV3-53P01767 116 aa9.87□□□□□ -0.83
MSH6-215ENST00000622629 MRPL53Q96EL3 112 aaKnown RBP9.87□□□□□ -0.83
MSH6-215ENST00000622629 C1orf43Q9BWL3 253 aa9.87□□□□□ -0.83
MSH6-215ENST00000622629 LINC01549A6NIU2 74 aa9.87□□□□□ -0.83
MSH6-215ENST00000622629 C19orf84I3L1E1 186 aa9.87□□□□□ -0.83
MSH6-215ENST00000622629 TAX1BP3O14907 124 aa9.87□□□□□ -0.83
MSH6-215ENST00000622629 CDKN1BP46527 198 aa9.87□□□□□ -0.83
MSH6-215ENST00000622629 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 A0A087WX48 190 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 K7EP13 123 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 ZNF493Q6ZR52 646 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 LENEPQ9Y5L5 61 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 TNRC6BQ9UPQ9 1833 aaKnown RBP9.86□□□□□ -0.83
MSH6-215ENST00000622629 PRSS29PA6NIE9 313 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 HLA-DRB4P13762 266 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 ANAPC13Q9BS18 74 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 HLA-DRB4X5D2U9 266 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 IGHV1OR15-1A0A075B7D0 117 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 GATA3P23771 443 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 MTORP42345 2549 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 TTC32Q5I0X7 151 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 ADAMTSL5Q6ZMM2 481 aa9.86□□□□□ -0.83
MSH6-215ENST00000622629 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 MYMXA0A1B0GTQ4 84 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 A0A1W2PPM0 123 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 ETDBQ3ZM63 59 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 C10orf105Q8TEF2 133 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 SMAD5-AS1Q9Y6J3 95 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 PMVKQ15126 192 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 DEFB136Q30KP8 78 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 TEX29Q8N6K0 151 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
MSH6-215ENST00000622629 IGF1P05019 195 aa9.84□□□□□ -0.83
MSH6-215ENST00000622629 PAX2Q02962 417 aa9.84□□□□□ -0.83
MSH6-215ENST00000622629 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
MSH6-215ENST00000622629 K7EP34 96 aa9.84□□□□□ -0.83
MSH6-215ENST00000622629 SPATA12Q7Z6I5 190 aa9.84□□□□□ -0.83
MSH6-215ENST00000622629 FSTL3O95633 263 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 TRPT1Q86TN4 253 aaKnown RBP9.83□□□□□ -0.84
MSH6-215ENST00000622629 NBEAQ8NFP9 2946 aa9.83□□□□□ -0.84
MSH6-215ENST00000622629 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms