RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CDSNQ15517 529 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 TMEM170BQ5T4T1 132 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 ATP5G1P05496 136 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 PRR25Q96S07 402 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 PINLYPA6NC86 204 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 INS-IGF2F8WCM5 200 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 P0DMU3 169 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 FAM231AP0DMU4 169 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 FAM231CP0DMU5 169 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 COX7CP15954 63 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 EBI3Q14213 229 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 CD177Q8N6Q3 437 aa6.13□□□□□ -1.43
VPS11-209ENST00000622309 MBD3L2Q8NHZ7 208 aaPredicted RBP6.13□□□□□ -1.43
VPS11-209ENST00000622309 IGHV3-21A0A0B4J1V1 117 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 A0A0J9YY99 117 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 ELANEP08246 267 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 WT1-ASQ06250 92 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 BBC3Q96PG8 261 aaPredicted RBP6.12□□□□□ -1.43
VPS11-209ENST00000622309 CXXC4Q9H2H0 198 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 MGAQ8IWI9 3026 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 CCL24O00175 119 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 ATP1A1-AS1Q5TC04 95 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 TMEM14CQ9P0S9 112 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 DSCAML1Q8TD84 2053 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 M0R3E3 92 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
VPS11-209ENST00000622309 TRBV19A0A075B6N1 114 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 EGR2P11161 476 aaPredicted RBP6.11□□□□□ -1.43
VPS11-209ENST00000622309 C10orf55Q5SWW7 151 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 C17orf77Q96MU5 243 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 GCN1Q92616 2671 aaKnown RBP6.11□□□□□ -1.43
VPS11-209ENST00000622309 A0A1W2PNU3 283 aaPredicted RBP6.11□□□□□ -1.43
VPS11-209ENST00000622309 hADV29S1A0JD25 119 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 IQCF6A8MYZ5 107 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 E7EUB6 86 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 PLA2G2AP14555 144 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 HCP5Q6MZN7 132 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 CTSZQ9UBR2 303 aa6.11□□□□□ -1.43
VPS11-209ENST00000622309 RPUSD1Q9UJJ7 312 aaKnown RBP6.11□□□□□ -1.43
VPS11-209ENST00000622309 SETXQ7Z333 2677 aaKnown RBP6.11□□□□□ -1.43
VPS11-209ENST00000622309 IGLV2-18A0A075B6J9 118 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 TRAV17A0A0B4J275 112 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 OVOL1O14753 267 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 CD59P13987 128 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 ZNF22P17026 224 aaPredicted RBP6.1□□□□□ -1.43
VPS11-209ENST00000622309 Q6ZT83 130 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 C11orf44Q8N8P7 122 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 CRYGAP11844 174 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 LYPD1Q8N2G4 141 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 JPT2Q9H910 190 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 ABCA1O95477 2261 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 H3BT86 120 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 J3QKU1 62 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 COX6B1P14854 86 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 LINC00482Q8N8I6 264 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 SLC25A29Q8N8R3 303 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 ZNRF1Q8ND25 227 aa6.1□□□□□ -1.43
VPS11-209ENST00000622309 TRAV41A0A0B4J266 112 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 TMEM258P61165 79 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 Q6ZS46 218 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 NEXN-AS1Q8NBZ9 246 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 METTL26Q96S19 204 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 DEFB127Q9H1M4 99 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 ASH1LQ9NR48 2969 aaKnown RBP6.09□□□□□ -1.43
VPS11-209ENST00000622309 ACYP1P07311 99 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 COX6CP09669 75 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 DLX6P56179 175 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 ORMDL2Q53FV1 153 aa6.09□□□□□ -1.43
VPS11-209ENST00000622309 LINC00643Q86TS7 51 aa6.09□□□□□ -1.44
VPS11-209ENST00000622309 KLF14Q8TD94 323 aaPredicted RBP6.09□□□□□ -1.44
VPS11-209ENST00000622309 BRK1Q8WUW1 75 aa6.09□□□□□ -1.44
VPS11-209ENST00000622309 LINC01600Q96MT4 127 aa6.09□□□□□ -1.44
VPS11-209ENST00000622309 ZZEF1O43149 2961 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.08□□□□□ -1.44
VPS11-209ENST00000622309 ZNF883P0CG24 379 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
VPS11-209ENST00000622309 FLNBO75369 2602 aaKnown RBP6.08□□□□□ -1.44
VPS11-209ENST00000622309 TRAV26-2A0A0B4J265 109 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 A0A0B4J2C4 111 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 H7C423 109 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 RUSC1-AS1Q66K80 236 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 DSCR8Q96T75 97 aa6.08□□□□□ -1.44
VPS11-209ENST00000622309 IGKV1D-17A0A075B6S4 117 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 ATOX1O00244 68 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
VPS11-209ENST00000622309 C17orf58Q2M2W7 97 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 ZNF672Q499Z4 452 aaPredicted RBP6.07□□□□□ -1.44
VPS11-209ENST00000622309 TMEM167AQ8TBQ9 72 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 IGKV2-40A0A087WW87 121 aaPredicted RBP6.07□□□□□ -1.44
VPS11-209ENST00000622309 IGKV2D-40P01614 121 aaPredicted RBP6.07□□□□□ -1.44
VPS11-209ENST00000622309 APELAP0DMC3 54 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 CD40P25942 277 aa6.07□□□□□ -1.44
VPS11-209ENST00000622309 DLX1P56177 255 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms