RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 ZMAT4Q9H898 229 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 CITED1Q99966 193 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 D6R8Y8 96 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 NUDT3O95989 172 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 FAM231BA6NCW3 169 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 NDUFS6O75380 124 aaKnown RBP9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 FHL3Q13643 280 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 F5H768 121 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 AMMECR1LQ6DCA0 310 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 OR10D4PQ8NGN7 298 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 MSRB1Q9NZV6 116 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 MDFICQ9P1T7 246 aa9.29□□□□□ -0.92
SCAMP1-207ENST00000621999 TYMSP04818 313 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 KRTAP10-3P60369 221 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 PRIMA1Q86XR5 153 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 OR5AL1P0C617 328 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 IGLV2-11P01706 119 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 ZFAND2AQ8N6M9 145 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 AP5S1Q9NUS5 200 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 UBE2L6O14933 153 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 PRM2P04554 102 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
SCAMP1-207ENST00000621999 IGKV3OR2-268A0A0C4DH90 116 aa9.27□□□□□ -0.92
SCAMP1-207ENST00000621999 PPP1R17O96001 155 aa9.27□□□□□ -0.93
SCAMP1-207ENST00000621999 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
SCAMP1-207ENST00000621999 TRAV26-2A0A0B4J265 109 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 Q6ZN92 141 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 NOTCH1P46531 2555 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 M0R2P5 195 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 CRIP1P50238 77 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 Q6ZQT7 251 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 SPXQ9BT56 116 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 PPBPP02775 128 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 GTSF1Q8WW33 167 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 FAM110AQ9BQ89 295 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 PHLDA1Q8WV24 401 aaPredicted RBP9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 C18orf15Q96N68 181 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 PRADC1Q9BSG0 188 aa9.26□□□□□ -0.93
SCAMP1-207ENST00000621999 TRBV6-1A0A0K0K1D8 114 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 PRR9Q5T870 116 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 FAM19A2Q8N3H0 131 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 SIGLEC8Q9NYZ4 499 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 A8MWV9 139 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 IGHV4-30-4P0DP06 118 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 ZNF493Q6ZR52 646 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 C19orf71A6NCJ1 209 aa9.25□□□□□ -0.93
SCAMP1-207ENST00000621999 G3V4G9 280 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 SOCS3O14543 225 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 RPL36AP83881 106 aaKnown RBP9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 RPL36ALQ969Q0 106 aaKnown RBP9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 MXRA5Q9NR99 2828 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 TRBV7-9A0A0J9YWB2 115 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 RASL11AQ6T310 242 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 C16orf74Q96GX8 76 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
SCAMP1-207ENST00000621999 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 GAGE1Q13065 139 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 GAGE4Q13068 117 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 GAGE5Q13069 117 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 SLAQ13239 276 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 A0A0J9YY99 117 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 RHODO00212 210 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 SERF1AO75920 110 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 JPT2Q9H910 190 aa9.23□□□□□ -0.93
SCAMP1-207ENST00000621999 A0A096LPF7 62 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 FRMD6-AS1P0C7T7 363 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 PDZD2O15018 2839 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 MAP1LC3CQ9BXW4 147 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 G0S2P27469 103 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 COTL1Q14019 142 aa9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
SCAMP1-207ENST00000621999 TRPT1Q86TN4 253 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms