RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 LRCOL1A6NCL2 159 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 ORM1P02763 201 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-210ENST00000621245 TCRAP04437 139 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 STAG3L2P0CL84 134 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 STAG3L3P0CL85 134 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 EVI2AP22794 236 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 ATP6V0CP27449 155 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 GCHFRP30047 84 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 Q5VSD8 79 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 NFE4Q86UQ8 179 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 SUN5Q8TC36 379 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 TXNDC17Q9BRA2 123 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 Q9UF83 564 aa7.66□□□□□ -1.18
CPNE3-210ENST00000621245 A0A1W2PPV4 95 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 RS1O15537 224 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 GCGP01275 180 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 RNASE3P12724 160 aaKnown RBP7.65□□□□□ -1.18
CPNE3-210ENST00000621245 GCSHP23434 173 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 WFDC2Q14508 124 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 ZNF876PQ49A33 203 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 ZNF506Q5JVG8 444 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 OR2G3Q8NGZ4 309 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 LINC00479Q96M42 142 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 Q9HAA7 133 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 PSG8Q9UQ74 426 aa7.65□□□□□ -1.18
CPNE3-210ENST00000621245 TRAV9-2A0A087WT02 112 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 FBLL1A6NHQ2 334 aaKnown RBP7.64□□□□□ -1.19
CPNE3-210ENST00000621245 IGHV3-30P01768 117 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 IGHV3-33P01772 117 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 IGHV3-30-5P0DP03 117 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 PPT1P50897 306 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 LINC00310P59036 64 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 DEFA1P59665 94 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 DEFA3P59666 94 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 ZNF726P1Q15940 193 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 FAM74A1Q5RGS3 127 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 PRNTQ86SH4 94 aa7.64□□□□□ -1.19
CPNE3-210ENST00000621245 TRAV34A0A0B4J273 112 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 IGHV3-38A0A0C4DH36 116 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 INAFM2P0DMQ5 153 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 TIRAPP58753 221 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 ARL6IP6Q8N6S5 226 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 C5orf17Q8NAS9 161 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 KCNS1Q96KK3 526 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 AQP10Q96PS8 301 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 JPT2Q9H910 190 aa7.63□□□□□ -1.19
CPNE3-210ENST00000621245 IGKV3D-20A0A0C4DH25 116 aa7.62□□□□□ -1.19
CPNE3-210ENST00000621245 RNF222A6NCQ9 220 aa7.62□□□□□ -1.19
CPNE3-210ENST00000621245 IBA57-AS1B1ANH7 110 aa7.62□□□□□ -1.19
CPNE3-210ENST00000621245 LINC00694P0DN24 101 aa7.62□□□□□ -1.19
CPNE3-210ENST00000621245 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-210ENST00000621245 RPL7L1Q6DKI1 246 aaKnown RBP7.62□□□□□ -1.19
CPNE3-210ENST00000621245 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
CPNE3-210ENST00000621245 EPDR1Q9UM22 224 aa7.62□□□□□ -1.19
CPNE3-210ENST00000621245 IGLV5-52A0A0A0MRZ9 124 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 PFN1P07737 140 aaKnown RBP7.61□□□□□ -1.19
CPNE3-210ENST00000621245 RHOHQ15669 191 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 OR10J3Q5JRS4 329 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 CYB561D1Q8N8Q1 229 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 DNAJC30Q96LL9 226 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 NDFIP1Q9BT67 221 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 SAMD10Q9BYL1 202 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 PARLQ9H300 379 aa7.61□□□□□ -1.19
CPNE3-210ENST00000621245 TRBV6-4A0A1B0GX49 114 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 G3V3Q6 166 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 TAAR5O14804 337 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 LECT2O14960 151 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 FGF8P55075 233 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-210ENST00000621245 UBE2G2P60604 165 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 SMUG1Q53HV7 270 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 LELP1Q5T871 98 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 C10orf126Q8N4M7 172 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 C14orf178Q8N769 122 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-210ENST00000621245 Q8N814 137 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
CPNE3-210ENST00000621245 SERTM2A0A1B0GWG4 89 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 K7EP13 123 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 PSCAO43653 123 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 CXorf1O96002 111 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 CRIP1P50238 77 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 GAGE1Q13065 139 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 GAGE4Q13068 117 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 GAGE5Q13069 117 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 UFSP1Q6NVU6 142 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 Q86TA4 180 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 FRZBQ92765 325 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 PRADC1Q9BSG0 188 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 TMEM167BQ9NRX6 74 aa7.59□□□□□ -1.19
CPNE3-210ENST00000621245 TRAV8-6A0A0B4J262 113 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 H3BVH4 76 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 LINC01620Q4KN68 170 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 SH2D6Q7Z4S9 175 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 DAZ4Q86SG3 579 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms