RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 CASZ1Q86V15 1759 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 ANK1P16157 1881 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 LOC100130705A0A1B0GUX0 176 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 EFCAB10A6NFE3 127 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 HIGD1CA8MV81 97 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 FAM25AB3EWG3 89 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 FAM25CB3EWG5 89 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 FAM25GB3EWG6 89 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 PIRTP0C851 137 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 HIST1H1DP16402 221 aaKnown RBP0.64□□□□□ -2.31
TARDBP-220ENST00000618606 EMX2Q04743 252 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 FXYD3Q14802 87 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 ZNF56Q15929 161 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 Q6ZQY7 126 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 ATOH7Q8N100 152 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 KCNRGQ8N5I3 272 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 Q8N6K4 173 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 VSTM2AQ8TAG5 236 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 PPDPFLQ8WWR9 84 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 PSMG3Q9BT73 122 aaPredicted RBP0.64□□□□□ -2.31
TARDBP-220ENST00000618606 TMEM191AQ9H0A3 160 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 MRPL35Q9NZE8 188 aaKnown RBP0.64□□□□□ -2.31
TARDBP-220ENST00000618606 ROCK2O75116 1388 aaKnown RBP0.64□□□□□ -2.31
TARDBP-220ENST00000618606 DLG5Q8TDM6 1919 aa0.64□□□□□ -2.31
TARDBP-220ENST00000618606 NCOA6Q14686 2063 aaPredicted RBP0.63□□□□□ -2.31
TARDBP-220ENST00000618606 PTPRMP28827 1452 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 TRBV10-1A0A0K0K1A3 114 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 TRBV30A0A0K0K1B3 111 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 LINC00587B1AMM8 73 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 IL5P05113 134 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 NPC2P61916 151 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 SPCS2Q15005 226 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 S100A7L2Q5SY68 101 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 XAF1Q6GPH4 301 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 C5orf56Q8N8D9 126 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 TSKUQ8WUA8 353 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 IFI27L1Q96BM0 104 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 SEC11CQ9BY50 192 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 TMEM242Q9NWH2 141 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 PEAK1Q9H792 1746 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 TECTAO75443 2155 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 MUC4Q99102 2169 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 EML5Q05BV3 1969 aa0.63□□□□□ -2.31
TARDBP-220ENST00000618606 ADGRB1O14514 1584 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 GRIN2AQ12879 1464 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 TRAV12-2A0A075B6T6 113 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 CCDC179H3BU77 68 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 GUCA1AP43080 201 aaPredicted RBP0.62□□□□□ -2.31
TARDBP-220ENST00000618606 CAV3P56539 151 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 UBE2G1P62253 170 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 MEIG1Q5JSS6 88 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 DEFB132Q7Z7B7 95 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 PDCD10Q9BUL8 212 aa0.62□□□□□ -2.31
TARDBP-220ENST00000618606 MYO18AQ92614 2054 aaKnown RBP0.61□□□□□ -2.31
TARDBP-220ENST00000618606 CDK12Q9NYV4 1490 aaPredicted RBP0.61□□□□□ -2.31
TARDBP-220ENST00000618606 CHD3Q12873 2000 aaKnown RBP0.61□□□□□ -2.31
TARDBP-220ENST00000618606 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.61□□□□□ -2.31
TARDBP-220ENST00000618606 TRAV2A0A0B4J234 112 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 SPAARA0A1B0GVQ0 90 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 A0A1W2PPM0 123 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 FXYD1O00168 92 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 DLEU1O43261 78 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 OR2T2Q6IF00 324 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 SCIMPQ6UWF3 145 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 LINC00575Q6W349 94 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 PLAC4Q8WY50 150 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 CCDC167Q9P0B6 97 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 PHLPP1O60346 1717 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 COL6A6A6NMZ7 2263 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 MBD5Q9P267 1494 aa0.61□□□□□ -2.31
TARDBP-220ENST00000618606 TMEM2Q9UHN6 1383 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 TRAV12-3A0A0B4J271 114 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 SNCGO76070 127 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 LY6G6CO95867 125 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 C9orf116Q5BN46 136 aaPredicted RBP0.6□□□□□ -2.31
TARDBP-220ENST00000618606 SPANXN1Q5VSR9 72 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.6□□□□□ -2.31
TARDBP-220ENST00000618606 SPTSSBQ8NFR3 76 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 C10orf82Q8WW14 230 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 LSM10Q969L4 123 aaKnown RBP0.6□□□□□ -2.31
TARDBP-220ENST00000618606 SPTSSAQ969W0 71 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 TMEM141Q96I45 108 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 AGPAT4-IT1Q9H0P7 198 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 MYOM3Q5VTT5 1437 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 CITO14578 2027 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 FANCMQ8IYD8 2048 aa0.6□□□□□ -2.31
TARDBP-220ENST00000618606 KIF13AQ9H1H9 1805 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 TCRBV3S1A0A5B6 114 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 NDUFB6O95139 128 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 ELOF1P60002 83 aaKnown RBP0.59□□□□□ -2.31
TARDBP-220ENST00000618606 SLC48A1Q6P1K1 146 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 Q6ZS92 163 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 C20orf197Q8N268 126 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 C1orf54Q8WWF1 131 aa0.59□□□□□ -2.31
TARDBP-220ENST00000618606 VIRMAQ69YN4 1812 aaKnown RBP0.59□□□□□ -2.32
TARDBP-220ENST00000618606 RREB1Q92766 1687 aa0.59□□□□□ -2.32
TARDBP-220ENST00000618606 FAM92AA1XBS5 289 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 A6NIN4 97 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 APOC1P02654 83 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 APODP05090 189 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms