RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 MANBALQ9NQG1 85 aa17.28■□□□□ 0.36
PMS1-220ENST00000618056 HECTD4Q9Y4D8 3996 aa17.27■□□□□ 0.36
PMS1-220ENST00000618056 M0R2N4 97 aa17.27■□□□□ 0.36
PMS1-220ENST00000618056 UBE2G1P62253 170 aa17.27■□□□□ 0.36
PMS1-220ENST00000618056 ATRAIDQ6UW56 229 aa17.27■□□□□ 0.36
PMS1-220ENST00000618056 ZNRF2Q8NHG8 242 aa17.27■□□□□ 0.36
PMS1-220ENST00000618056 A0A096LPF7 62 aa17.26■□□□□ 0.35
PMS1-220ENST00000618056 FABP5P3A8MUU1 101 aa17.26■□□□□ 0.35
PMS1-220ENST00000618056 SRP19P09132 144 aaKnown RBP17.26■□□□□ 0.35
PMS1-220ENST00000618056 VAX2Q9UIW0 290 aa17.26■□□□□ 0.35
PMS1-220ENST00000618056 HHLA3Q9XRX5 114 aa17.26■□□□□ 0.35
PMS1-220ENST00000618056 DNAH17Q9UFH2 4485 aa17.26■□□□□ 0.35
PMS1-220ENST00000618056 TRAV4A0A0B4J268 109 aa17.25■□□□□ 0.35
PMS1-220ENST00000618056 PAX4O43316 350 aa17.25■□□□□ 0.35
PMS1-220ENST00000618056 CRYBA4P53673 196 aa17.25■□□□□ 0.35
PMS1-220ENST00000618056 SOHLH1Q5JUK2 328 aa17.25■□□□□ 0.35
PMS1-220ENST00000618056 ZNF479Q96JC4 524 aa17.25■□□□□ 0.35
PMS1-220ENST00000618056 FAT2Q9NYQ8 4349 aa17.25■□□□□ 0.35
PMS1-220ENST00000618056 LTAP01374 205 aa17.24■□□□□ 0.35
PMS1-220ENST00000618056 ZC2HC1AQ96GY0 325 aa17.24■□□□□ 0.35
PMS1-220ENST00000618056 C9orf85Q96MD7 179 aa17.24■□□□□ 0.35
PMS1-220ENST00000618056 IGKV3D-20A0A0C4DH25 116 aa17.24■□□□□ 0.35
PMS1-220ENST00000618056 AKR1C3P42330 323 aa17.24■□□□□ 0.35
PMS1-220ENST00000618056 ESRGQ1W209 222 aa17.24■□□□□ 0.35
PMS1-220ENST00000618056 TRGV4A0A0C4DH28 118 aa17.23■□□□□ 0.35
PMS1-220ENST00000618056 LINC00336Q6ZUF6 198 aa17.23■□□□□ 0.35
PMS1-220ENST00000618056 OR4C5Q8NGB2 326 aa17.23■□□□□ 0.35
PMS1-220ENST00000618056 PTH2Q96A98 100 aa17.23■□□□□ 0.35
PMS1-220ENST00000618056 ICOSQ9Y6W8 199 aa17.23■□□□□ 0.35
PMS1-220ENST00000618056 S100A9P06702 114 aaKnown RBP17.22■□□□□ 0.35
PMS1-220ENST00000618056 RNASE3P12724 160 aaKnown RBP17.22■□□□□ 0.35
PMS1-220ENST00000618056 CRIP1P50238 77 aa17.22■□□□□ 0.35
PMS1-220ENST00000618056 CEBPGP53567 150 aa17.22■□□□□ 0.35
PMS1-220ENST00000618056 CLRN3Q8NCR9 226 aa17.22■□□□□ 0.35
PMS1-220ENST00000618056 UPK3BQ9BT76 320 aa17.22■□□□□ 0.35
PMS1-220ENST00000618056 ZNF876PQ49A33 203 aa17.21■□□□□ 0.35
PMS1-220ENST00000618056 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.21■□□□□ 0.35
PMS1-220ENST00000618056 SCO2A0A1W2PP80 73 aa17.2■□□□□ 0.34
PMS1-220ENST00000618056 NDUFS6O75380 124 aaKnown RBP17.2■□□□□ 0.34
PMS1-220ENST00000618056 MEF2BQ02080 365 aaPredicted RBP17.2■□□□□ 0.34
PMS1-220ENST00000618056 FAM162BQ5T6X4 162 aa17.2■□□□□ 0.34
PMS1-220ENST00000618056 MRPS16Q9Y3D3 137 aaKnown RBP17.2■□□□□ 0.34
PMS1-220ENST00000618056 NBDYA0A0U1RRE5 68 aa17.19■□□□□ 0.34
PMS1-220ENST00000618056 RTL8CO15255 209 aa17.19■□□□□ 0.34
PMS1-220ENST00000618056 ZNF674Q2M3X9 581 aa17.19■□□□□ 0.34
PMS1-220ENST00000618056 C9JCJ5 164 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 SH2D1AO60880 128 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 MRPL23Q16540 153 aaKnown RBP17.18■□□□□ 0.34
PMS1-220ENST00000618056 Q9H8V8 135 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 B4DEV8 164 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 M0R036 132 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 CIDEAO60543 219 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 ORM1P02763 201 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 DNLZQ5SXM8 178 aa17.18■□□□□ 0.34
PMS1-220ENST00000618056 S100A4P26447 101 aaKnown RBP17.17■□□□□ 0.34
PMS1-220ENST00000618056 ASIPP42127 132 aa17.17■□□□□ 0.34
PMS1-220ENST00000618056 TXNDC17Q9BRA2 123 aa17.17■□□□□ 0.34
PMS1-220ENST00000618056 IL36BQ9NZH7 164 aa17.17■□□□□ 0.34
PMS1-220ENST00000618056 PGPEP1LA6NFU8 196 aa17.16■□□□□ 0.34
PMS1-220ENST00000618056 RS1O15537 224 aa17.16■□□□□ 0.34
PMS1-220ENST00000618056 PIK3CD-AS1Q5SR53 167 aa17.16■□□□□ 0.34
PMS1-220ENST00000618056 CFAP126Q5VTH2 177 aa17.16■□□□□ 0.34
PMS1-220ENST00000618056 TMEM250H0YL14 139 aa17.15■□□□□ 0.34
PMS1-220ENST00000618056 K7EQD1 137 aa17.15■□□□□ 0.34
PMS1-220ENST00000618056 RHEBQ15382 184 aa17.15■□□□□ 0.34
PMS1-220ENST00000618056 LINC01559Q495D7 138 aa17.15■□□□□ 0.34
PMS1-220ENST00000618056 FAM74A3Q4VXF1 159 aa17.15■□□□□ 0.34
PMS1-220ENST00000618056 MLST8Q9BVC4 326 aa17.15■□□□□ 0.34
PMS1-220ENST00000618056 GATA1P15976 413 aaPredicted RBP17.14■□□□□ 0.33
PMS1-220ENST00000618056 C1orf134Q5TEV5 83 aa17.14■□□□□ 0.33
PMS1-220ENST00000618056 NEGR1Q7Z3B1 354 aa17.14■□□□□ 0.33
PMS1-220ENST00000618056 C11orf52Q96A22 123 aa17.14■□□□□ 0.33
PMS1-220ENST00000618056 GYPEP15421 78 aa17.13■□□□□ 0.33
PMS1-220ENST00000618056 NHLRC2Q8NBF2 726 aa17.13■□□□□ 0.33
PMS1-220ENST00000618056 TMA7Q9Y2S6 64 aaKnown RBP17.13■□□□□ 0.33
PMS1-220ENST00000618056 SRIP30626 198 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 ZNF575Q86XF7 245 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 BAGE2Q86Y30 109 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 RPS10P5Q9NQ39 176 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 PKHD1P08F94 4074 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 PDE6DO43924 150 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 CBLN2Q8IUK8 224 aa17.12■□□□□ 0.33
PMS1-220ENST00000618056 C7orf77A4D0Y5 90 aa17.11■□□□□ 0.33
PMS1-220ENST00000618056 H3BVH4 76 aa17.11■□□□□ 0.33
PMS1-220ENST00000618056 RPL35P42766 123 aaKnown RBP17.11■□□□□ 0.33
PMS1-220ENST00000618056 TTC32Q5I0X7 151 aa17.11■□□□□ 0.33
PMS1-220ENST00000618056 LYPD5Q6UWN5 251 aa17.11■□□□□ 0.33
PMS1-220ENST00000618056 PRSS29PA6NIE9 313 aa17.1■□□□□ 0.33
PMS1-220ENST00000618056 ARMS2P0C7Q2 107 aa17.1■□□□□ 0.33
PMS1-220ENST00000618056 A0A1W2PPQ1 181 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 ZNF727A8MUV8 499 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 A8MWV9 139 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 PNRC1Q12796 327 aaPredicted RBP17.09■□□□□ 0.33
PMS1-220ENST00000618056 SLC25A29Q8N8R3 303 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 SMIM7Q9BQ49 75 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 SCRT2Q9NQ03 307 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 SMCO4Q9NRQ5 59 aa17.09■□□□□ 0.33
PMS1-220ENST00000618056 PKD1P98161 4303 aa17.08■□□□□ 0.32
PMS1-220ENST00000618056 TRBV6-4A0A1B0GX49 114 aa17.08■□□□□ 0.32
PMS1-220ENST00000618056 GRIFINA4D1Z8 144 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms