RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 SNHG12Q9BXW3 62 aa14.39□□□□□ -0.11
AC008878.3-201ENST00000617428 TLN2Q9Y4G6 2542 aa14.39□□□□□ -0.11
AC008878.3-201ENST00000617428 C9JAW5 83 aa14.39□□□□□ -0.11
AC008878.3-201ENST00000617428 F8VRH5 84 aa14.39□□□□□ -0.11
AC008878.3-201ENST00000617428 TMEM126AQ9H061 195 aa14.39□□□□□ -0.11
AC008878.3-201ENST00000617428 SIRPDQ9H106 197 aa14.38□□□□□ -0.11
AC008878.3-201ENST00000617428 ESM1Q9NQ30 184 aa14.38□□□□□ -0.11
AC008878.3-201ENST00000617428 CEP295Q9C0D2 2601 aa14.38□□□□□ -0.11
AC008878.3-201ENST00000617428 C2orf70A6NJV1 201 aa14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 CHD3Q12873 2000 aaKnown RBP14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 C16orf54Q6UWD8 224 aa14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 SPART-AS1P0CW21 52 aa14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 PCDH15Q96QU1 1955 aa14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 IGKV2-29A2NJV5 120 aaPredicted RBP14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 IGHG2P01859 326 aa14.37□□□□□ -0.11
AC008878.3-201ENST00000617428 CLPSL1A2RUU4 121 aa14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 HERVK_113P63121 156 aa14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 OCIAD2Q56VL3 154 aa14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 ZNF493Q6ZR52 646 aa14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 CITED2Q99967 270 aaPredicted RBP14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 POLR3KQ9Y2Y1 108 aaPredicted RBP14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 TEX22C9J3V5 150 aa14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 SPINK8P0C7L1 97 aa14.36□□□□□ -0.11
AC008878.3-201ENST00000617428 E7EUB6 86 aa14.35□□□□□ -0.11
AC008878.3-201ENST00000617428 CD5LO43866 347 aa14.35□□□□□ -0.11
AC008878.3-201ENST00000617428 GATA1P15976 413 aaPredicted RBP14.35□□□□□ -0.11
AC008878.3-201ENST00000617428 ATP5G1P05496 136 aa14.35□□□□□ -0.11
AC008878.3-201ENST00000617428 LMO4P61968 165 aa14.35□□□□□ -0.11
AC008878.3-201ENST00000617428 EP400Q96L91 3159 aa14.35□□□□□ -0.11
AC008878.3-201ENST00000617428 LGALS9BQ3B8N2 356 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 LGALS9CQ6DKI2 356 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 GYPEP15421 78 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 Q6ZWC4 215 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 ODF3L1Q8IXM7 274 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 C22orf34Q6ZV56 151 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 CRYGCP07315 174 aa14.34□□□□□ -0.11
AC008878.3-201ENST00000617428 SIGMAR1Q99720 223 aa14.33□□□□□ -0.11
AC008878.3-201ENST00000617428 J3QQQ9 107 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 MYCNOSP40205 109 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 GAGE2AQ6NT46 116 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 C1orf43Q9BWL3 253 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 EDA2RQ9HAV5 297 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 GAGE2BQ13066 116 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 GAGE2EQ4V326 116 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 ZNF48Q96MX3 618 aaPredicted RBP14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 GAGE2DQ9UEU5 116 aa14.33□□□□□ -0.12
AC008878.3-201ENST00000617428 LOXL1Q08397 574 aaPredicted RBP14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 PRAC2D3DTV9 90 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 DEFB1P60022 68 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 MRPL23Q16540 153 aaKnown RBP14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 C5orf38Q86SI9 138 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 GPHB5Q86YW7 130 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 C16orf74Q96GX8 76 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 SCRT2Q9NQ03 307 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 MSRB1Q9NZV6 116 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 MRPL36Q9P0J6 103 aaKnown RBP14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 PLXNB3Q9ULL4 1909 aa14.32□□□□□ -0.12
AC008878.3-201ENST00000617428 K7EMT4 169 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 DEFB135Q30KP9 77 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 NCKAP5O14513 1909 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 IGLL1P15814 213 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 RNF152Q8N8N0 203 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 WFDC11Q8NEX6 87 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 ATP6V0E2Q8NHE4 81 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 C20orf144Q9BQM9 153 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 DKK2Q9UBU2 259 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 CCL18P55774 89 aa14.31□□□□□ -0.12
AC008878.3-201ENST00000617428 TMEM61Q8N0U2 210 aa14.3□□□□□ -0.12
AC008878.3-201ENST00000617428 DEFB4AO15263 64 aa14.3□□□□□ -0.12
AC008878.3-201ENST00000617428 IGLV10-54A0A075B6I4 117 aa14.3□□□□□ -0.12
AC008878.3-201ENST00000617428 RPL39LQ96EH5 51 aaKnown RBP14.3□□□□□ -0.12
AC008878.3-201ENST00000617428 DSCAMO60469 2012 aa14.3□□□□□ -0.12
AC008878.3-201ENST00000617428 DNAJC9-AS1A6NH13 148 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 C10orf91Q5T1B1 145 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 A6NDX4 124 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 DLEU1O43261 78 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 TRBV12-3P01733 135 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 UBE2BP63146 152 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 UNQ9165/PRO28630Q6UXU0 137 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 ANAPC13Q9BS18 74 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 ABCA12Q86UK0 2595 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 ZNF462Q96JM2 2506 aa14.29□□□□□ -0.12
AC008878.3-201ENST00000617428 USP9XQ93008 2570 aaPredicted RBP14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 IGLC2P0DOY2 106 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 IGLC3P0DOY3 106 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 Q8N1Y9 231 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 SETD2Q9BYW2 2564 aaPredicted RBP14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 TNFRSF13BO14836 293 aaPredicted RBP14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 TRAV25A0A0B4J276 109 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 FAM167A-AS1Q96KT0 104 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 ICOSQ9Y6W8 199 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 COL4A3Q01955 1670 aa14.28□□□□□ -0.12
AC008878.3-201ENST00000617428 WI2-2373I1.2A0A1W2PRP0 233 aa14.27□□□□□ -0.12
AC008878.3-201ENST00000617428 IGLV2-14P01704 120 aa14.27□□□□□ -0.12
AC008878.3-201ENST00000617428 SUMO4Q6EEV6 95 aa14.27□□□□□ -0.12
AC008878.3-201ENST00000617428 FANCD2OSQ96PS1 177 aa14.27□□□□□ -0.12
AC008878.3-201ENST00000617428 SMAD5-AS1Q9Y6J3 95 aa14.27□□□□□ -0.12
AC008878.3-201ENST00000617428 TEX48A0A1B0GUV7 120 aa14.26□□□□□ -0.13
AC008878.3-201ENST00000617428 TMEM89A2RUT3 159 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms