RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FAM223BA6NKX1 122 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 UBE2E1P51965 193 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 CRIP2P52943 208 aaPredicted RBP11.76□□□□□ -0.53
GPN1-212ENST00000616939 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
GPN1-212ENST00000616939 ANXA2RQ3ZCQ2 193 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 FAM223AQ8IWN6 122 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 CFC1BP0CG36 223 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 CFC1P0CG37 223 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
GPN1-212ENST00000616939 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
GPN1-212ENST00000616939 LINC00315P59091 139 aa11.75□□□□□ -0.53
GPN1-212ENST00000616939 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
GPN1-212ENST00000616939 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
GPN1-212ENST00000616939 OTOGLQ3ZCN5 2332 aa11.75□□□□□ -0.53
GPN1-212ENST00000616939 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 IGF1P05019 195 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 RNASE3P12724 160 aaKnown RBP11.74□□□□□ -0.53
GPN1-212ENST00000616939 KLHL30-AS1Q8NEE0 82 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 AMELXQ99217 191 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 TRBV6-5A0A0K0K1A5 114 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 LY6HO94772 140 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 PTH2Q96A98 100 aa11.74□□□□□ -0.53
GPN1-212ENST00000616939 G3V318 75 aa11.73□□□□□ -0.53
GPN1-212ENST00000616939 VCYO14598 125 aa11.73□□□□□ -0.53
GPN1-212ENST00000616939 P0DMU3 169 aa11.73□□□□□ -0.53
GPN1-212ENST00000616939 FAM231AP0DMU4 169 aa11.73□□□□□ -0.53
GPN1-212ENST00000616939 FAM231CP0DMU5 169 aa11.73□□□□□ -0.53
GPN1-212ENST00000616939 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
GPN1-212ENST00000616939 PRR30Q53SZ7 412 aaPredicted RBP11.73□□□□□ -0.53
GPN1-212ENST00000616939 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 NDUFA4O00483 81 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
GPN1-212ENST00000616939 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 CITED1Q99966 193 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 APC2O95996 2303 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 BRI3O95415 125 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 IGHV1-69P01742 117 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 Q6ZS46 218 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 C5orf56Q8N8D9 126 aa11.72□□□□□ -0.53
GPN1-212ENST00000616939 J3QQQ9 107 aa11.71□□□□□ -0.54
GPN1-212ENST00000616939 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.54
GPN1-212ENST00000616939 KIR2DL4Q99706 377 aa11.71□□□□□ -0.54
GPN1-212ENST00000616939 A0A0J9YX75 114 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 FAM90A27PA6NNH2 459 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 LEPROTO15243 131 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 ARL3P36405 182 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 RHOHQ15669 191 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 ZFAND6Q6FIF0 208 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 LGALS9O00182 355 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 LGALS3P17931 250 aaKnown RBP11.7□□□□□ -0.54
GPN1-212ENST00000616939 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
GPN1-212ENST00000616939 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
GPN1-212ENST00000616939 MUC4Q99102 2169 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 ZZEF1O43149 2961 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 TRAV41A0A0B4J266 112 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 LINC01548A6NM66 108 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 SLC25A20O43772 301 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 SRD5A1P18405 259 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 Q5PR19 223 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
GPN1-212ENST00000616939 RNF183Q96D59 192 aa11.69□□□□□ -0.54
GPN1-212ENST00000616939 KLLNB2CW77 178 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 GNRH2O43555 120 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
GPN1-212ENST00000616939 SAA4P35542 130 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 NSUN5P1Q3KNT7 163 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 ZNRF2Q8NHG8 242 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 CEP250Q9BV73 2442 aa11.68□□□□□ -0.54
GPN1-212ENST00000616939 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.67□□□□□ -0.54
GPN1-212ENST00000616939 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 H3BUA1 57 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 J3KRW8 73 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 SPRY2O43597 315 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 MOB4Q9Y3A3 225 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 Q6Q795 121 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 ANAPC13Q9BS18 74 aa11.67□□□□□ -0.54
GPN1-212ENST00000616939 TPRP12270 2363 aaKnown RBP11.66□□□□□ -0.54
GPN1-212ENST00000616939 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
GPN1-212ENST00000616939 LOC400499M0QZD8 3231 aa11.66□□□□□ -0.54
GPN1-212ENST00000616939 WNK2Q9Y3S1 2297 aa11.66□□□□□ -0.54
GPN1-212ENST00000616939 A4D1N5 150 aa11.65□□□□□ -0.54
GPN1-212ENST00000616939 NPFFO15130 113 aa11.65□□□□□ -0.54
GPN1-212ENST00000616939 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.54
GPN1-212ENST00000616939 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
GPN1-212ENST00000616939 CNOT1A5YKK6 2376 aaKnown RBP11.65□□□□□ -0.54
GPN1-212ENST00000616939 RHODO00212 210 aa11.65□□□□□ -0.55
GPN1-212ENST00000616939 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.55
GPN1-212ENST00000616939 ATXN8Q156A1 80 aa11.65□□□□□ -0.55
GPN1-212ENST00000616939 UNQ9165/PRO28630Q6UXU0 137 aa11.65□□□□□ -0.55
GPN1-212ENST00000616939 MDFICQ9P1T7 246 aa11.65□□□□□ -0.55
GPN1-212ENST00000616939 C9JAW5 83 aa11.64□□□□□ -0.55
GPN1-212ENST00000616939 M0R2P5 195 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms