RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 GNRH2O43555 120 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 NTF4P34130 210 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 ARTNQ5T4W7 220 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
TCF4-248ENST00000616053 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 DSCAMO60469 2012 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 GREM1O60565 184 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 IGHV2-5P01817 119 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 DENND4CQ5VZ89 1909 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 FAM208BQ5VWN6 2430 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 MALRD1Q5VYJ5 2156 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 UBE2CO00762 179 aa9.95□□□□□ -0.82
TCF4-248ENST00000616053 ANAPC1Q9H1A4 1944 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 PLCH1Q4KWH8 1693 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 PTPRBP23467 1997 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 HELZP42694 1942 aaKnown RBP9.94□□□□□ -0.82
TCF4-248ENST00000616053 DDX60LQ5H9U9 1706 aaKnown RBP9.94□□□□□ -0.82
TCF4-248ENST00000616053 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 AJUBAQ96IF1 538 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 IL15RAQ13261 267 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 CCDC168Q8NDH2 2452 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 PLXNA2O75051 1894 aa9.94□□□□□ -0.82
TCF4-248ENST00000616053 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
TCF4-248ENST00000616053 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 IGHV4-38-2P0DP08 117 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 RALGAPA2Q2PPJ7 1873 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 LINC00473A8K010 186 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 C15orf62A8K5M9 175 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 BPY2O14599 106 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 FOXI1Q12951 378 aa9.93□□□□□ -0.82
TCF4-248ENST00000616053 SCN7AQ01118 1682 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 IGHV4-61A0A0C4DH41 118 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 PRSS57Q6UWY2 283 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 H0YIZ8 118 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 TCL1BO95988 128 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 MRPL51Q4U2R6 128 aaKnown RBP9.92□□□□□ -0.82
TCF4-248ENST00000616053 IGLV3-32A0A0A0MS00 114 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 H3BMG7 143 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 TRBV19A0A075B6N1 114 aa9.92□□□□□ -0.82
TCF4-248ENST00000616053 TRBV7-3A0A075B6L6 115 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 Q6Q795 121 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 NDUFA11Q86Y39 141 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 PRO0255Q9UI72 69 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 LOC285556D6RIA3 1793 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 SPATA12Q7Z6I5 190 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 TMEM61Q8N0U2 210 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 NDUFS7O75251 213 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 LINC00205P59089 165 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 HGFACQ04756 655 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 SPANXCQ9NY87 97 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.91□□□□□ -0.82
TCF4-248ENST00000616053 PPDPFQ9H3Y8 114 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 LINC01548A6NM66 108 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 C1QCP02747 245 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 CD300CQ08708 224 aa9.91□□□□□ -0.82
TCF4-248ENST00000616053 IGLV9-49A0A0B4J1Y8 123 aa9.9□□□□□ -0.82
TCF4-248ENST00000616053 CEP192Q8TEP8 1941 aa9.9□□□□□ -0.82
TCF4-248ENST00000616053 C20orf78Q9BR46 151 aa9.9□□□□□ -0.82
TCF4-248ENST00000616053 RNF126Q9BV68 326 aa9.9□□□□□ -0.82
TCF4-248ENST00000616053 F8VRH5 84 aa9.9□□□□□ -0.83
TCF4-248ENST00000616053 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.83
TCF4-248ENST00000616053 C4orf3Q8WVX3 66 aa9.9□□□□□ -0.83
TCF4-248ENST00000616053 ZNF491Q8N8L2 437 aa9.9□□□□□ -0.83
TCF4-248ENST00000616053 PLA2G5P39877 138 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 SPG11Q96JI7 2443 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 CCL25O15444 150 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 ETDBQ3ZM63 59 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 TRPM7Q96QT4 1865 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 IGF1P05019 195 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 P0DMU3 169 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 FAM231AP0DMU4 169 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 FAM231CP0DMU5 169 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 ITGB4P16144 1822 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 LECT2O14960 151 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
TCF4-248ENST00000616053 VOPP1Q96AW1 172 aa9.89□□□□□ -0.83
TCF4-248ENST00000616053 MRPL35Q9NZE8 188 aaKnown RBP9.89□□□□□ -0.83
TCF4-248ENST00000616053 CTRLP40313 264 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 XIRP1Q702N8 1843 aaKnown RBP9.88□□□□□ -0.83
TCF4-248ENST00000616053 TRAV10A0A0B4J240 114 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 CENPVL3A0A0U1RRI6 287 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 IGLL1P15814 213 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 ARAP2Q8WZ64 1704 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 C3orf79P0CE67 100 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 MRPL55Q7Z7F7 128 aaKnown RBP9.88□□□□□ -0.83
TCF4-248ENST00000616053 PRSS47A8MTI9 375 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 Q8N9L7 120 aa9.88□□□□□ -0.83
TCF4-248ENST00000616053 ALS2Q96Q42 1657 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 TMEM256-PLSCR3K7ERE1 68 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 DNAJC9-AS1A6NH13 148 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 FNDC10F2Z333 226 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 H3BRN7 92 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 TAF1LQ8IZX4 1826 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms