RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 NOP10Q9NPE3 64 aaKnown RBP3.58□□□□□ -1.84
CHD9-221ENST00000615216 MRPL36Q9P0J6 103 aaKnown RBP3.58□□□□□ -1.84
CHD9-221ENST00000615216 HIGD1BQ9P298 99 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 DKK2Q9UBU2 259 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 KLF2Q9Y5W3 355 aaPredicted RBP3.58□□□□□ -1.84
CHD9-221ENST00000615216 TMEM89A2RUT3 159 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 CCL24O00175 119 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
CHD9-221ENST00000615216 I3L2K1 104 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 NBL1P41271 181 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 IGFL2Q6UWQ7 119 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 RNF138Q8WVD3 245 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 ICOSQ9Y6W8 199 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 U3KQE9 123 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 NPSP0C0P6 89 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 Q9H8V8 135 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 RIF1Q5UIP0 2472 aaKnown RBP3.58□□□□□ -1.84
CHD9-221ENST00000615216 PLXNB1O43157 2135 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 PLCE1Q9P212 2302 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 BAALC-AS2P0C853 105 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 HAMPP81172 84 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 ETDBQ3ZM63 59 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 CACNA1HO95180 2353 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 H3BMG7 143 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 CTRLP40313 264 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 C9orf47Q6ZRZ4 202 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 C16orf54Q6UWD8 224 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 C15orf53Q8NAA6 179 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 MUC22E2RYF6 1773 aaPredicted RBP3.57□□□□□ -1.84
CHD9-221ENST00000615216 CGB3P0DN86 165 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 CXCL5P42830 114 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 SMIM20Q8N5G0 67 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 DEFB125Q8N687 156 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 XCL1P47992 114 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 COX7B2Q8TF08 81 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 CENPVL3A0A0U1RRI6 287 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 IGHG2P01859 326 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 GNRH2O43555 120 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 NXPH4O95158 308 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 WISP1O95388 367 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 DIAPH2-AS1Q14236 149 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 C4orf3Q8WVX3 66 aa3.57□□□□□ -1.84
CHD9-221ENST00000615216 WI2-2373I1.2A0A1W2PRP0 233 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 J3QKU1 62 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 C1orf43Q9BWL3 253 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 RAI1Q7Z5J4 1906 aaPredicted RBP3.56□□□□□ -1.84
CHD9-221ENST00000615216 K7EIM0 57 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 COX7A2LO14548 114 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 ZNF524Q96C55 264 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.56□□□□□ -1.84
CHD9-221ENST00000615216 IGKV2-29A2NJV5 120 aaPredicted RBP3.56□□□□□ -1.84
CHD9-221ENST00000615216 K7EMT4 169 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 MRPL23Q16540 153 aaKnown RBP3.56□□□□□ -1.84
CHD9-221ENST00000615216 C5orf56Q8N8D9 126 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 ATOX1O00244 68 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 ATP6V0E2Q8NHE4 81 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 IGHV7-81A0A0B4J1V7 117 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 A0A0B4J2C4 111 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 CTSZQ9UBR2 303 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 WIPF3A6NGB9 483 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 CRYGCP07315 174 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 C17orf77Q96MU5 243 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 DKK4Q9UBT3 224 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 ETDCA0A1B0GVM5 59 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 F6UB75 175 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 UBE2BP63146 152 aa3.56□□□□□ -1.84
CHD9-221ENST00000615216 ZFP2Q6ZN57 461 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 TRBV7-3A0A075B6L6 115 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 IGKV2D-24A0A075B6R9 120 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 C11orf86A6NJI1 115 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 IGLL5B9A064 214 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 GYPEP15421 78 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 RPL18AQ02543 176 aaKnown RBP3.55□□□□□ -1.84
CHD9-221ENST00000615216 DEFB113Q30KQ7 82 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 DEFB112Q30KQ8 113 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 RNASE13Q5GAN3 156 aaKnown RBP3.55□□□□□ -1.84
CHD9-221ENST00000615216 PRSS33Q8NF86 280 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 RPL39LQ96EH5 51 aaKnown RBP3.55□□□□□ -1.84
CHD9-221ENST00000615216 TIMM17AQ99595 171 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 SPART-AS1P0CW21 52 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 TIRAPP58753 221 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 Q71RC1 249 aaPredicted RBP3.55□□□□□ -1.84
CHD9-221ENST00000615216 IGLV2-23P01705 113 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 PCP2Q8IVA1 136 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 TINCRA0A1B0GVN0 87 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 MAPK1IP1LQ8NDC0 245 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 MAJINQ3KP22 176 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 BAALCQ8WXS3 180 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 OPRPNQ99935 248 aaPredicted RBP3.55□□□□□ -1.84
CHD9-221ENST00000615216 BUB3O43684 328 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
CHD9-221ENST00000615216 TRAV4A0A0B4J268 109 aa3.54□□□□□ -1.84
CHD9-221ENST00000615216 NDUFS5O43920 106 aa3.54□□□□□ -1.84
CHD9-221ENST00000615216 PDE6GP18545 87 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms