RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 MLST8Q9BVC4 326 aa11.59□□□□□ -0.55
CBWD3-211ENST00000615061 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
CBWD3-211ENST00000615061 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
CBWD3-211ENST00000615061 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
CBWD3-211ENST00000615061 C11orf52Q96A22 123 aa11.58□□□□□ -0.56
CBWD3-211ENST00000615061 H3BVH4 76 aa11.57□□□□□ -0.56
CBWD3-211ENST00000615061 S100A9P06702 114 aaKnown RBP11.57□□□□□ -0.56
CBWD3-211ENST00000615061 ASIPP42127 132 aa11.57□□□□□ -0.56
CBWD3-211ENST00000615061 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
CBWD3-211ENST00000615061 BCL2P10415 239 aa11.56□□□□□ -0.56
CBWD3-211ENST00000615061 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
CBWD3-211ENST00000615061 RPL19P84098 196 aaKnown RBP11.56□□□□□ -0.56
CBWD3-211ENST00000615061 SLAQ13239 276 aa11.56□□□□□ -0.56
CBWD3-211ENST00000615061 LINC01559Q495D7 138 aa11.56□□□□□ -0.56
CBWD3-211ENST00000615061 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
CBWD3-211ENST00000615061 PRR27Q6MZM9 219 aa11.56□□□□□ -0.56
CBWD3-211ENST00000615061 IFNA1P01562 189 aa11.55□□□□□ -0.56
CBWD3-211ENST00000615061 ARMS2P0C7Q2 107 aa11.55□□□□□ -0.56
CBWD3-211ENST00000615061 FAM3BP58499 235 aaPredicted RBP11.55□□□□□ -0.56
CBWD3-211ENST00000615061 Q6ZR54 194 aa11.55□□□□□ -0.56
CBWD3-211ENST00000615061 TXNDC17Q9BRA2 123 aa11.55□□□□□ -0.56
CBWD3-211ENST00000615061 IL36BQ9NZH7 164 aa11.55□□□□□ -0.56
CBWD3-211ENST00000615061 ICOSQ9Y6W8 199 aa11.55□□□□□ -0.56
CBWD3-211ENST00000615061 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 RAB19A4D1S5 217 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 RS1O15537 224 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 JPT2Q9H910 190 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 PKHD1P08F94 4074 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 K7EQD1 137 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 CENPWQ5EE01 88 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 DNLZQ5SXM8 178 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 VAX2Q9UIW0 290 aa11.54□□□□□ -0.56
CBWD3-211ENST00000615061 IGLV2-8P01709 118 aa11.53□□□□□ -0.56
CBWD3-211ENST00000615061 GYPEP15421 78 aa11.53□□□□□ -0.56
CBWD3-211ENST00000615061 GATA1P15976 413 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-211ENST00000615061 PTH2Q96A98 100 aa11.53□□□□□ -0.56
CBWD3-211ENST00000615061 MED9Q9NWA0 146 aa11.53□□□□□ -0.56
CBWD3-211ENST00000615061 PKD1P98161 4303 aa11.53□□□□□ -0.56
CBWD3-211ENST00000615061 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
CBWD3-211ENST00000615061 PDE6DO43924 150 aa11.52□□□□□ -0.57
CBWD3-211ENST00000615061 BLOC1S1P78537 153 aa11.52□□□□□ -0.57
CBWD3-211ENST00000615061 MRPL23Q16540 153 aaKnown RBP11.52□□□□□ -0.57
CBWD3-211ENST00000615061 Q9H8V8 135 aa11.52□□□□□ -0.57
CBWD3-211ENST00000615061 LYPD6BQ8NI32 183 aa11.51□□□□□ -0.57
CBWD3-211ENST00000615061 MRPS16Q9Y3D3 137 aaKnown RBP11.51□□□□□ -0.57
CBWD3-211ENST00000615061 RTL8CO15255 209 aa11.51□□□□□ -0.57
CBWD3-211ENST00000615061 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
CBWD3-211ENST00000615061 SLC25A29Q8N8R3 303 aa11.51□□□□□ -0.57
CBWD3-211ENST00000615061 SAMD10Q9BYL1 202 aa11.51□□□□□ -0.57
CBWD3-211ENST00000615061 SCRT2Q9NQ03 307 aa11.51□□□□□ -0.57
CBWD3-211ENST00000615061 NBDYA0A0U1RRE5 68 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 SRIP30626 198 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 GNG4P50150 75 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 Q6ZSN1 163 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 NEGR1Q7Z3B1 354 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 UPK3BQ9BT76 320 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 PARLQ9H300 379 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
CBWD3-211ENST00000615061 M0R381 172 aa11.49□□□□□ -0.57
CBWD3-211ENST00000615061 PCNPQ8WW12 178 aaKnown RBP11.49□□□□□ -0.57
CBWD3-211ENST00000615061 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
CBWD3-211ENST00000615061 DNAH11Q96DT5 4516 aa11.49□□□□□ -0.57
CBWD3-211ENST00000615061 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
CBWD3-211ENST00000615061 A8MWV9 139 aa11.49□□□□□ -0.57
CBWD3-211ENST00000615061 PIK3CD-AS1Q5SR53 167 aa11.49□□□□□ -0.57
CBWD3-211ENST00000615061 TAGLN2P37802 199 aaKnown RBP11.48□□□□□ -0.57
CBWD3-211ENST00000615061 UFSP1Q6NVU6 142 aa11.48□□□□□ -0.57
CBWD3-211ENST00000615061 MUC21A0A0G2JKD1 596 aa11.47□□□□□ -0.57
CBWD3-211ENST00000615061 MUC21A0A140T8X8 626 aa11.47□□□□□ -0.57
CBWD3-211ENST00000615061 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
CBWD3-211ENST00000615061 OR10AG1Q8NH19 301 aa11.47□□□□□ -0.57
CBWD3-211ENST00000615061 Q9UF83 564 aa11.47□□□□□ -0.57
CBWD3-211ENST00000615061 A0A087WWL8 130 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 C19orf71A6NCJ1 209 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 CIDEAO60543 219 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 NXPH4O95158 308 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 GZMBP10144 247 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 TOR2AQ5JU69 321 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 FAM74A4Q5TZK3 123 aa11.46□□□□□ -0.57
CBWD3-211ENST00000615061 RHOHQ15669 191 aa11.46□□□□□ -0.58
CBWD3-211ENST00000615061 C1orf134Q5TEV5 83 aa11.46□□□□□ -0.58
CBWD3-211ENST00000615061 ZFP2Q6ZN57 461 aa11.46□□□□□ -0.58
CBWD3-211ENST00000615061 CXCL1P09341 107 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 MED14OSP0DP75 135 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 SSTP61278 116 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 ZFP82Q8N141 532 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 SFRP2Q96HF1 295 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 PRADC1Q9BSG0 188 aa11.45□□□□□ -0.58
CBWD3-211ENST00000615061 CRYGDP07320 174 aa11.44□□□□□ -0.58
CBWD3-211ENST00000615061 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-211ENST00000615061 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
CBWD3-211ENST00000615061 K7EN84 100 aa11.44□□□□□ -0.58
CBWD3-211ENST00000615061 SIVA1O15304 175 aa11.44□□□□□ -0.58
CBWD3-211ENST00000615061 SNAI2O43623 268 aa11.44□□□□□ -0.58
CBWD3-211ENST00000615061 CEBPGP53567 150 aa11.44□□□□□ -0.58
CBWD3-211ENST00000615061 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms