RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LINC01545Q5VT33 79 aa8.46□□□□□ -1.05
FAM3A-221ENST00000612856 URB1-AS1Q96HZ7 61 aa8.46□□□□□ -1.05
FAM3A-221ENST00000612856 NDUFA4L2Q9NRX3 87 aa8.46□□□□□ -1.05
FAM3A-221ENST00000612856 NPIPB6E9PJ23 425 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 PTH2Q96A98 100 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 SLC25A2Q9BXI2 301 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.06
FAM3A-221ENST00000612856 IGHV7-81A0A0B4J1V7 117 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 NEGR1Q7Z3B1 354 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 IGF2BP2-AS1Q96M15 143 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 TMEM14BQ9NUH8 114 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.06
FAM3A-221ENST00000612856 HERV-K104P63124 156 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 CFAP161Q6P656 301 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 SNCGO76070 127 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 PVRIGQ6DKI7 326 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 MAP1LC3AQ9H492 121 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 F8W1H4 67 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 LY6G6DO95868 133 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 TCRAP04437 139 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 C17orf77Q96MU5 243 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 DAZ1Q9NQZ3 744 aaKnown RBP8.45□□□□□ -1.06
FAM3A-221ENST00000612856 SIGLEC8Q9NYZ4 499 aa8.45□□□□□ -1.06
FAM3A-221ENST00000612856 OR11H12B2RN74 326 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 MT-ATP8P03928 68 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 LYZL1Q6UWQ5 148 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 OR11H2Q8NH07 326 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 WIPF2Q8TF74 440 aaPredicted RBP8.44□□□□□ -1.06
FAM3A-221ENST00000612856 CITED1Q99966 193 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 FAM90A9PA6NNJ1 464 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 IGLV1-47P01700 117 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 IGKCP01834 107 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
FAM3A-221ENST00000612856 CITED2Q99967 270 aaPredicted RBP8.44□□□□□ -1.06
FAM3A-221ENST00000612856 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 TRBV12-3P01733 135 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 IGHV4-31P0DP07 118 aa8.44□□□□□ -1.06
FAM3A-221ENST00000612856 AGRNO00468 2067 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 C1orf159Q96HA4 380 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 FMC1Q96HJ9 113 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 OVOL1O14753 267 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 HOXD3P31249 432 aaPredicted RBP8.43□□□□□ -1.06
FAM3A-221ENST00000612856 GAGE2BQ13066 116 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 GAGE2EQ4V326 116 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 Q8N9W7 124 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 GAGE2DQ9UEU5 116 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 SVEP1Q4LDE5 3571 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 J3QLI3 93 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 SCGB1A1P11684 91 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 Q6ZS46 218 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
FAM3A-221ENST00000612856 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 ATP5IP56385 69 aaPredicted RBP8.42□□□□□ -1.06
FAM3A-221ENST00000612856 OR11H6Q8NGC7 330 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 RNF5Q99942 180 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 TMEM238LA0A1B0GVL6 79 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 DNAJC9-AS1A6NH13 148 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 IGLL5B9A064 214 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 CCL24O00175 119 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 DPM2O94777 84 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 FOXI2Q6ZQN5 318 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 ESM1Q9NQ30 184 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 MRPL36Q9P0J6 103 aaKnown RBP8.42□□□□□ -1.06
FAM3A-221ENST00000612856 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
FAM3A-221ENST00000612856 TRGV1A0A0A0MS02 117 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 SIRPDQ9H106 197 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 SPANXB1Q9NS25 103 aaPredicted RBP8.41□□□□□ -1.06
FAM3A-221ENST00000612856 DEFB4AO15263 64 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 P0C879 139 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 C12orf74Q32Q52 190 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 USMG5Q96IX5 58 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 TRBV7-1A0A0A6YYK4 115 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 TMEM75Q8N9X5 138 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 AJUBAQ96IF1 538 aa8.41□□□□□ -1.06
FAM3A-221ENST00000612856 IGHV3-16A0A0C4DH30 117 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 LINC01619G3V211 115 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 CRXO43186 299 aaPredicted RBP8.4□□□□□ -1.06
FAM3A-221ENST00000612856 IGLV2-23P01705 113 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 GAGE5Q13069 117 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 GAGE6Q13070 117 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 NSD1Q96L73 2696 aaPredicted RBP8.4□□□□□ -1.06
FAM3A-221ENST00000612856 A0A096LPF7 62 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 FXYD5Q96DB9 178 aa8.4□□□□□ -1.06
FAM3A-221ENST00000612856 IGKV2D-26A0A0A0MRZ7 120 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 UTP20O75691 2785 aaKnown RBP8.4□□□□□ -1.07
FAM3A-221ENST00000612856 NPYP01303 97 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 LGALS9BQ3B8N2 356 aa8.4□□□□□ -1.07
FAM3A-221ENST00000612856 LGALS9CQ6DKI2 356 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms