RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 MTORP42345 2549 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 SNCGO76070 127 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 SLURP1P55000 103 aa10.12□□□□□ -0.79
TCF3-220ENST00000611869 LGALS1P09382 135 aaKnown RBP10.11□□□□□ -0.79
TCF3-220ENST00000611869 KIR3DS1Q14943 382 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 MRPL52Q86TS9 123 aaKnown RBP10.11□□□□□ -0.79
TCF3-220ENST00000611869 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 J3QKU1 62 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 ZNF479Q96JC4 524 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 EBI3Q14213 229 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 ZNF124Q15973 351 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 MBD6Q96DN6 1003 aa10.11□□□□□ -0.79
TCF3-220ENST00000611869 SAMD5Q5TGI4 173 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 A0A1W2PPR1 153 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
TCF3-220ENST00000611869 TRPT1Q86TN4 253 aaKnown RBP10.1□□□□□ -0.79
TCF3-220ENST00000611869 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
TCF3-220ENST00000611869 A6NDX4 124 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 COX8AP10176 69 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 LURAP1LQ8IV03 231 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
TCF3-220ENST00000611869 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
TCF3-220ENST00000611869 VPS13AQ96RL7 3174 aa10.09□□□□□ -0.79
TCF3-220ENST00000611869 MYCNOSP40205 109 aa10.09□□□□□ -0.79
TCF3-220ENST00000611869 Q6ZVH6 145 aa10.09□□□□□ -0.79
TCF3-220ENST00000611869 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
TCF3-220ENST00000611869 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
TCF3-220ENST00000611869 LAMA1P25391 3075 aa10.09□□□□□ -0.79
TCF3-220ENST00000611869 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 A0A087WW49 117 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 CD5LO43866 347 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 ESDP10768 282 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 PCP4P48539 62 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 DNAH14Q0VDD8 3507 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
TCF3-220ENST00000611869 SPXQ9BT56 116 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 TRBV6-1A0A0K0K1D8 114 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 CFHR3Q02985 330 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
TCF3-220ENST00000611869 TNRC6BQ9UPQ9 1833 aaKnown RBP10.07□□□□□ -0.8
TCF3-220ENST00000611869 IGHV3-38A0A0C4DH36 116 aa10.07□□□□□ -0.8
TCF3-220ENST00000611869 NPC2P61916 151 aa10.07□□□□□ -0.8
TCF3-220ENST00000611869 NPSP0C0P6 89 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 CTRLP40313 264 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 MEGF9Q9H1U4 602 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 ADARB2-AS1A8MUL3 147 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 F8VRH5 84 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
TCF3-220ENST00000611869 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 DSCAML1Q8TD84 2053 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 PCP2Q8IVA1 136 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 VCANP13611 3396 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
TCF3-220ENST00000611869 TET2Q6N021 2002 aaPredicted RBP10.06□□□□□ -0.8
TCF3-220ENST00000611869 TRAV13-1A0A0B4J241 112 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 CRIP1P50238 77 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 PAX2Q02962 417 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 Q8N6K4 173 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 C20orf78Q9BR46 151 aa10.06□□□□□ -0.8
TCF3-220ENST00000611869 ANKRD39Q53RE8 183 aa10.05□□□□□ -0.8
TCF3-220ENST00000611869 LOXL1Q08397 574 aaPredicted RBP10.05□□□□□ -0.8
TCF3-220ENST00000611869 ZFAND3Q9H8U3 227 aa10.05□□□□□ -0.8
TCF3-220ENST00000611869 PMVKQ15126 192 aa10.05□□□□□ -0.8
TCF3-220ENST00000611869 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 I3L3M4 83 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 A8MWV9 139 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 LINC01545Q5VT33 79 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 GPHB5Q86YW7 130 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 GAGE12JA6NER3 117 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 RHODO00212 210 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 IGLV2-11P01706 119 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 GAGE1Q13065 139 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 GAGE4Q13068 117 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 GAGE5Q13069 117 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 GAGE13Q4V321 117 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
TCF3-220ENST00000611869 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 IGF1P05019 195 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 COPS9Q8WXC6 57 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 K7EMT4 169 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 C10orf99Q6UWK7 81 aa10.03□□□□□ -0.8
TCF3-220ENST00000611869 PRSS29PA6NIE9 313 aa10.02□□□□□ -0.8
TCF3-220ENST00000611869 CCL24O00175 119 aa10.02□□□□□ -0.8
TCF3-220ENST00000611869 AZU1P20160 251 aa10.02□□□□□ -0.8
TCF3-220ENST00000611869 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms