RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 Q8N7P7 452 aa10.78□□□□□ -0.68
MUC1-223ENST00000611571 SCRT2Q9NQ03 307 aa10.78□□□□□ -0.68
MUC1-223ENST00000611571 IGLV11-55A0A075B6I3 123 aa10.77□□□□□ -0.68
MUC1-223ENST00000611571 MYMXA0A1B0GTQ4 84 aa10.77□□□□□ -0.68
MUC1-223ENST00000611571 TNRC6AQ8NDV7 1962 aaKnown RBP10.77□□□□□ -0.68
MUC1-223ENST00000611571 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 CFHR3Q02985 330 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 LAMA1P25391 3075 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 LINC01548A6NM66 108 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 PF4P02776 101 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 RPL35AP18077 110 aaKnown RBP10.77□□□□□ -0.69
MUC1-223ENST00000611571 C19orf71A6NCJ1 209 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 ZFP36P26651 326 aaKnown RBP10.77□□□□□ -0.69
MUC1-223ENST00000611571 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 C12orf74Q32Q52 190 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 GAGE2EQ4V326 116 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 CEND1Q8N111 149 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.69
MUC1-223ENST00000611571 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 BUB3O43684 328 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 TIMM21Q9BVV7 248 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 WFDC2Q14508 124 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 C2orf82Q6UX34 121 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 MBD6Q96DN6 1003 aa10.76□□□□□ -0.69
MUC1-223ENST00000611571 EPG5Q9HCE0 2579 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 LINC00158P58513 81 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 SPEGQ15772 3267 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 LINC00310P59036 64 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 MSMBP08118 114 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 PMVKQ15126 192 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 ATG2AQ2TAZ0 1938 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 NRGNQ92686 78 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
MUC1-223ENST00000611571 HOXB4P17483 251 aaPredicted RBP10.74□□□□□ -0.69
MUC1-223ENST00000611571 ZNF462Q96JM2 2506 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 A0A1B0GXF2 115 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 CRYGCP07315 174 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 Q8N9W7 124 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 AZU1P20160 251 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 TCF15Q12870 199 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 NSUN5P1Q3KNT7 163 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 SPATA12Q7Z6I5 190 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 OR11H6Q8NGC7 330 aa10.74□□□□□ -0.69
MUC1-223ENST00000611571 A0A087WX48 190 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 CENPVL3A0A0U1RRI6 287 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 MLST8Q9BVC4 326 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 YAE1D1Q9NRH1 226 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 PRRC2AP48634 2157 aaKnown RBP10.73□□□□□ -0.69
MUC1-223ENST00000611571 TRAV8-4A0A0B4J246 113 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 C8orf31Q8N9H6 132 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 SZT2Q5T011 3432 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 VWC2LB2RUY7 222 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 RPL39P62891 51 aaKnown RBP10.73□□□□□ -0.69
MUC1-223ENST00000611571 PRIMA1Q86XR5 153 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 JPT2Q9H910 190 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 IGHV4-38-2P0DP08 117 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 TCTEX1D4Q5JR98 221 aa10.73□□□□□ -0.69
MUC1-223ENST00000611571 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 FGF6P10767 208 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 PLEKHB2Q96CS7 222 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 MGAQ8IWI9 3026 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 Q8NA96 180 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 LY6G5BQ8NDX9 201 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 CDKN1BP46527 198 aa10.72□□□□□ -0.69
MUC1-223ENST00000611571 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.69
MUC1-223ENST00000611571 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
MUC1-223ENST00000611571 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
MUC1-223ENST00000611571 IGHV4-59P01825 116 aa10.71□□□□□ -0.69
MUC1-223ENST00000611571 ZFAND6Q6FIF0 208 aa10.71□□□□□ -0.69
MUC1-223ENST00000611571 J3QQQ9 107 aa10.71□□□□□ -0.7
MUC1-223ENST00000611571 PAX4O43316 350 aa10.71□□□□□ -0.7
MUC1-223ENST00000611571 UNQ9165/PRO28630Q6UXU0 137 aa10.71□□□□□ -0.7
MUC1-223ENST00000611571 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.7
MUC1-223ENST00000611571 TRANK1O15050 2925 aa10.71□□□□□ -0.7
MUC1-223ENST00000611571 IGHV1OR15-1A0A075B7D0 117 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 NDUFA4O00483 81 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 IGF1P05019 195 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 CRIP1P50238 77 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 GAGE4Q13068 117 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 GAGE5Q13069 117 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
MUC1-223ENST00000611571 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.69□□□□□ -0.7
MUC1-223ENST00000611571 CTRLP40313 264 aa10.69□□□□□ -0.7
MUC1-223ENST00000611571 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
MUC1-223ENST00000611571 RPL36ALQ969Q0 106 aaKnown RBP10.69□□□□□ -0.7
MUC1-223ENST00000611571 NBEAQ8NFP9 2946 aa10.69□□□□□ -0.7
MUC1-223ENST00000611571 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
MUC1-223ENST00000611571 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
MUC1-223ENST00000611571 IGLL5B9A064 214 aa10.69□□□□□ -0.7
MUC1-223ENST00000611571 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms