RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 SRIP30626 198 aa13.23□□□□□ -0.29
TCF3-219ENST00000610756 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
TCF3-219ENST00000610756 NXPH4O95158 308 aa13.22□□□□□ -0.29
TCF3-219ENST00000610756 S100A9P06702 114 aaKnown RBP13.22□□□□□ -0.29
TCF3-219ENST00000610756 S100A4P26447 101 aaKnown RBP13.22□□□□□ -0.29
TCF3-219ENST00000610756 PIK3CD-AS1Q5SR53 167 aa13.22□□□□□ -0.29
TCF3-219ENST00000610756 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
TCF3-219ENST00000610756 EIF5AL1Q6IS14 154 aaKnown RBP13.22□□□□□ -0.29
TCF3-219ENST00000610756 TXNDC17Q9BRA2 123 aa13.22□□□□□ -0.29
TCF3-219ENST00000610756 A0A1B0GV50 99 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 B4DEV8 164 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 KRBOX1C9JBD0 128 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 RAB5CP51148 216 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 ZNF674Q2M3X9 581 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 FAM162BQ5T6X4 162 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 SH2D6Q7Z4S9 175 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 IL36BQ9NZH7 164 aa13.21□□□□□ -0.29
TCF3-219ENST00000610756 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
TCF3-219ENST00000610756 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
TCF3-219ENST00000610756 ASIPP42127 132 aa13.2□□□□□ -0.3
TCF3-219ENST00000610756 AKR1C3P42330 323 aa13.2□□□□□ -0.3
TCF3-219ENST00000610756 TNP2Q05952 138 aa13.2□□□□□ -0.3
TCF3-219ENST00000610756 ZNF575Q86XF7 245 aa13.2□□□□□ -0.3
TCF3-219ENST00000610756 SH2D1AO60880 128 aa13.19□□□□□ -0.3
TCF3-219ENST00000610756 C1QBP02746 253 aa13.19□□□□□ -0.3
TCF3-219ENST00000610756 SLC25A29Q8N8R3 303 aa13.19□□□□□ -0.3
TCF3-219ENST00000610756 LOC100131303A0A0U1RQF7 123 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 A8MWV9 139 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 TIRAPP58753 221 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 CCL20P78556 96 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 ZFP2Q6ZN57 461 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 PRADC1Q9BSG0 188 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 MLST8Q9BVC4 326 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 DNAH11Q96DT5 4516 aa13.17□□□□□ -0.3
TCF3-219ENST00000610756 IGHV3-73A0A0B4J1V6 119 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 K7EP13 123 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 M0R036 132 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 ARMS2P0C7Q2 107 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 MGST1P10620 155 aaKnown RBP13.16□□□□□ -0.3
TCF3-219ENST00000610756 SULT1A2P50226 295 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 RHOHQ15669 191 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 LINC01559Q495D7 138 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 SLC51BQ86UW2 128 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
TCF3-219ENST00000610756 TRAV9-2A0A087WT02 112 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 DMRTA1Q5VZB9 504 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 BAGE2Q86Y30 109 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 NHLRC2Q8NBF2 726 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 HERC2O95714 4834 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 KIAA1109Q2LD37 5005 aa13.15□□□□□ -0.3
TCF3-219ENST00000610756 DYNC1H1Q14204 4646 aaKnown RBP13.15□□□□□ -0.3
TCF3-219ENST00000610756 GRIFINA4D1Z8 144 aa13.14□□□□□ -0.31
TCF3-219ENST00000610756 H3BVH4 76 aa13.14□□□□□ -0.31
TCF3-219ENST00000610756 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
TCF3-219ENST00000610756 PARLQ9H300 379 aa13.14□□□□□ -0.31
TCF3-219ENST00000610756 GNG13Q9P2W3 67 aa13.14□□□□□ -0.31
TCF3-219ENST00000610756 LY96Q9Y6Y9 160 aa13.14□□□□□ -0.31
TCF3-219ENST00000610756 LINC00315P59091 139 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 UFSP1Q6NVU6 142 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 MED14OSP0DP75 135 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 Q6ZSN1 163 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 AKAP14Q86UN6 197 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 WFDC10BQ8IUB3 73 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 JPT2Q9H910 190 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
TCF3-219ENST00000610756 TMSB15BA0A087X1C1 80 aa13.12□□□□□ -0.31
TCF3-219ENST00000610756 EVI2AP22794 236 aa13.12□□□□□ -0.31
TCF3-219ENST00000610756 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
TCF3-219ENST00000610756 C11orf52Q96A22 123 aa13.12□□□□□ -0.31
TCF3-219ENST00000610756 Q6ZRN7 208 aaPredicted RBP13.11□□□□□ -0.31
TCF3-219ENST00000610756 SFRP2Q96HF1 295 aa13.11□□□□□ -0.31
TCF3-219ENST00000610756 SAMD10Q9BYL1 202 aa13.11□□□□□ -0.31
TCF3-219ENST00000610756 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
TCF3-219ENST00000610756 hCG_2014768A0A024R1R8 64 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 RHODO00212 210 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 CXCL1P09341 107 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 NFE4Q86UQ8 179 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 ZFP82Q8N141 532 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 C9orf62Q8N4C0 152 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 ATP6V0E2Q8NHE4 81 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 GTSF1LQ9H1H1 148 aa13.09□□□□□ -0.31
TCF3-219ENST00000610756 IGHV3-38A0A0C4DH36 116 aa13.08□□□□□ -0.32
TCF3-219ENST00000610756 CRYGDP07320 174 aa13.08□□□□□ -0.32
TCF3-219ENST00000610756 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
TCF3-219ENST00000610756 DERL1Q9BUN8 251 aa13.08□□□□□ -0.32
TCF3-219ENST00000610756 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.32
TCF3-219ENST00000610756 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
TCF3-219ENST00000610756 M0R381 172 aa13.07□□□□□ -0.32
TCF3-219ENST00000610756 PDE6DO43924 150 aa13.07□□□□□ -0.32
TCF3-219ENST00000610756 IFNA1P01562 189 aa13.07□□□□□ -0.32
TCF3-219ENST00000610756 RPL19P84098 196 aaKnown RBP13.07□□□□□ -0.32
TCF3-219ENST00000610756 LELP1Q5T871 98 aa13.07□□□□□ -0.32
TCF3-219ENST00000610756 C10orf126Q8N4M7 172 aa13.07□□□□□ -0.32
TCF3-219ENST00000610756 SSBP4Q9BWG4 385 aaPredicted RBP13.07□□□□□ -0.32
TCF3-219ENST00000610756 C14orf178Q8N769 122 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms