RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 K7EQM0 130 aa11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 IL15RAQ13261 267 aa11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 LGALSLQ3ZCW2 172 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 OR2T35Q8NGX2 323 aa11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
CHMP4A-211ENST00000609024 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 S100A4P26447 101 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 PTH2Q96A98 100 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 C9orf85Q96MD7 179 aa11.31□□□□□ -0.6
CHMP4A-211ENST00000609024 A0A1W2PPV4 95 aa11.3□□□□□ -0.6
CHMP4A-211ENST00000609024 GCGP01275 180 aa11.3□□□□□ -0.6
CHMP4A-211ENST00000609024 GNG5P63218 68 aa11.3□□□□□ -0.6
CHMP4A-211ENST00000609024 LRRC37A5PQ49AS3 106 aa11.3□□□□□ -0.6
CHMP4A-211ENST00000609024 SDHCQ99643 169 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-211ENST00000609024 SERTM2A0A1B0GWG4 89 aa11.29□□□□□ -0.6
CHMP4A-211ENST00000609024 Q0VG73 95 aa11.29□□□□□ -0.6
CHMP4A-211ENST00000609024 PQLC2Q6ZP29 291 aa11.29□□□□□ -0.6
CHMP4A-211ENST00000609024 NIT1Q86X76 327 aa11.29□□□□□ -0.6
CHMP4A-211ENST00000609024 C1orf43Q9BWL3 253 aa11.29□□□□□ -0.6
CHMP4A-211ENST00000609024 PARLQ9H300 379 aa11.29□□□□□ -0.6
CHMP4A-211ENST00000609024 PLA2G10O15496 165 aa11.28□□□□□ -0.6
CHMP4A-211ENST00000609024 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
CHMP4A-211ENST00000609024 OR5AC2Q9NZP5 309 aa11.28□□□□□ -0.6
CHMP4A-211ENST00000609024 EIF3GO75821 320 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 CRPP02741 224 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 DNAJC30Q96LL9 226 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 CHCHD7Q9BUK0 85 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.61
CHMP4A-211ENST00000609024 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
CHMP4A-211ENST00000609024 RNASE3P12724 160 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-211ENST00000609024 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-211ENST00000609024 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
CHMP4A-211ENST00000609024 DAZAP1Q96EP5 407 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-211ENST00000609024 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
CHMP4A-211ENST00000609024 A0A0D9SG52 128 aa11.25□□□□□ -0.61
CHMP4A-211ENST00000609024 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
CHMP4A-211ENST00000609024 TMEM262E9PQX1 116 aa11.25□□□□□ -0.61
CHMP4A-211ENST00000609024 HNRNPA3P51991 378 aaKnown RBP11.25□□□□□ -0.61
CHMP4A-211ENST00000609024 RHODO00212 210 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 SIX6O95475 246 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 ASIPP42127 132 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 CYCSP99999 105 aaKnown RBP11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 PRNTQ86SH4 94 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 C14orf178Q8N769 122 aaPredicted RBP11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 ZC2HC1AQ96GY0 325 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 PSG8Q9UQ74 426 aa11.24□□□□□ -0.61
CHMP4A-211ENST00000609024 TCRAP04437 139 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 Q6ZRU5 148 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 HSD17B11Q8NBQ5 300 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 LINC00479Q96M42 142 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 SMIM3Q9BZL3 60 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 PKHD1L1Q86WI1 4243 aa11.23□□□□□ -0.61
CHMP4A-211ENST00000609024 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
CHMP4A-211ENST00000609024 HLA-DQA1P01909 254 aa11.22□□□□□ -0.61
CHMP4A-211ENST00000609024 FLI1Q01543 452 aaPredicted RBP11.22□□□□□ -0.61
CHMP4A-211ENST00000609024 ATRAIDQ6UW56 229 aa11.22□□□□□ -0.61
CHMP4A-211ENST00000609024 PET100P0DJ07 73 aa11.21□□□□□ -0.61
CHMP4A-211ENST00000609024 MZT2BQ6NZ67 158 aa11.21□□□□□ -0.61
CHMP4A-211ENST00000609024 DPH3Q96FX2 82 aa11.21□□□□□ -0.61
CHMP4A-211ENST00000609024 Q9UF83 564 aa11.21□□□□□ -0.61
CHMP4A-211ENST00000609024 USP17L23D6RBM5 183 aa11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 RPL36AP83881 106 aaKnown RBP11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 DGAT2L7PQ6IED9 249 aa11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 C15orf54Q8N8G6 183 aa11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 RPL36ALQ969Q0 106 aaKnown RBP11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 JPT2Q9H910 190 aa11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 HSPB11Q9Y547 144 aa11.2□□□□□ -0.62
CHMP4A-211ENST00000609024 H0YIZ8 118 aa11.19□□□□□ -0.62
CHMP4A-211ENST00000609024 ARL14EPLP0DKL9 152 aa11.19□□□□□ -0.62
CHMP4A-211ENST00000609024 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.19□□□□□ -0.62
CHMP4A-211ENST00000609024 OR11H4Q8NGC9 324 aa11.19□□□□□ -0.62
CHMP4A-211ENST00000609024 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
CHMP4A-211ENST00000609024 FABP5P3A8MUU1 101 aa11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 H3BVH4 76 aa11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 ANGP03950 147 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 RPL12P30050 165 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 RAB2AP61019 212 aa11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
CHMP4A-211ENST00000609024 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 B4DEV8 164 aa11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 CDC34P49427 236 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 SUMO1P63165 101 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 UFSP1Q6NVU6 142 aa11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 PPP1R1CQ8WVI7 109 aa11.17□□□□□ -0.62
CHMP4A-211ENST00000609024 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms