RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 A0A0J9YY99 117 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 BRI3O95415 125 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 CRYGDP07320 174 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 ARL3P36405 182 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 POLEQ07864 2286 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 IGLV4-69A0A075B6H9 119 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 IGIPA6NJ69 53 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 C11orf86A6NJI1 115 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 K7ENP7 123 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 CCL21O00585 134 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 IGF1P05019 195 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 TEN1Q86WV5 123 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 ZNF418Q8TF45 676 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-220ENST00000608988 CDIP1Q9H305 208 aa16.89■□□□□ 0.29
SHANK2-220ENST00000608988 LOC107984156A0A0G2JMH3 177 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 M0QXV9 152 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 CRYBA4P53673 196 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 ARL17AQ8IVW1 177 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 SYT8Q8NBV8 401 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 MOB4Q9Y3A3 225 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 KIF25-AS1Q9Y6Z4 181 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 ZFHX4Q86UP3 3567 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 PCNX1Q96RV3 2341 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 ARHGAP32A7KAX9 2087 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 LINC01548A6NM66 108 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 VCYO14598 125 aa16.88■□□□□ 0.29
SHANK2-220ENST00000608988 RNASE3P12724 160 aaKnown RBP16.88■□□□□ 0.29
SHANK2-220ENST00000608988 NPFFO15130 113 aa16.87■□□□□ 0.29
SHANK2-220ENST00000608988 DUSP14O95147 198 aaKnown RBP16.87■□□□□ 0.29
SHANK2-220ENST00000608988 APC2O95996 2303 aa16.87■□□□□ 0.29
SHANK2-220ENST00000608988 POLR2KP53803 58 aaKnown RBP16.86■□□□□ 0.29
SHANK2-220ENST00000608988 SLC25A29Q8N8R3 303 aa16.86■□□□□ 0.29
SHANK2-220ENST00000608988 H3BUA1 57 aa16.86■□□□□ 0.29
SHANK2-220ENST00000608988 RNASE4P34096 147 aaKnown RBP16.86■□□□□ 0.29
SHANK2-220ENST00000608988 LINC00315P59091 139 aa16.86■□□□□ 0.29
SHANK2-220ENST00000608988 ZFP2Q6ZN57 461 aa16.86■□□□□ 0.29
SHANK2-220ENST00000608988 TP53TG1Q9Y2A0 90 aa16.86■□□□□ 0.29
SHANK2-220ENST00000608988 TSHBP01222 138 aa16.85■□□□□ 0.29
SHANK2-220ENST00000608988 IGHV3-30P01768 117 aa16.85■□□□□ 0.29
SHANK2-220ENST00000608988 IGHV3-30-5P0DP03 117 aa16.85■□□□□ 0.29
SHANK2-220ENST00000608988 KIR2DL4Q99706 377 aa16.85■□□□□ 0.29
SHANK2-220ENST00000608988 ASPMQ8IZT6 3477 aa16.85■□□□□ 0.29
SHANK2-220ENST00000608988 NFE4Q86UQ8 179 aa16.84■□□□□ 0.29
SHANK2-220ENST00000608988 C10orf126Q8N4M7 172 aa16.84■□□□□ 0.29
SHANK2-220ENST00000608988 TRBV6-5A0A0K0K1A5 114 aa16.84■□□□□ 0.29
SHANK2-220ENST00000608988 A8MWV9 139 aa16.84■□□□□ 0.29
SHANK2-220ENST00000608988 USMG5Q96IX5 58 aa16.84■□□□□ 0.29
SHANK2-220ENST00000608988 J3KRW8 73 aa16.83■□□□□ 0.28
SHANK2-220ENST00000608988 KLHL30-AS1Q8NEE0 82 aa16.83■□□□□ 0.28
SHANK2-220ENST00000608988 GNRH2O43555 120 aa16.82■□□□□ 0.28
SHANK2-220ENST00000608988 SPINK8P0C7L1 97 aa16.82■□□□□ 0.28
SHANK2-220ENST00000608988 ADORA2A-AS1P86434 159 aa16.82■□□□□ 0.28
SHANK2-220ENST00000608988 ZNF876PQ49A33 203 aa16.82■□□□□ 0.28
SHANK2-220ENST00000608988 Q6ZUT4 128 aa16.82■□□□□ 0.28
SHANK2-220ENST00000608988 TMEM262E9PQX1 116 aa16.81■□□□□ 0.28
SHANK2-220ENST00000608988 CFC1BP0CG36 223 aa16.81■□□□□ 0.28
SHANK2-220ENST00000608988 CFC1P0CG37 223 aa16.81■□□□□ 0.28
SHANK2-220ENST00000608988 PRO1854Q9UHT4 67 aa16.81■□□□□ 0.28
SHANK2-220ENST00000608988 KLLNB2CW77 178 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 TCL1BO95988 128 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 GEMIN7Q9H840 131 aaKnown RBP16.8■□□□□ 0.28
SHANK2-220ENST00000608988 TRBV27A0A0K0K1C4 114 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 IGHV1-69P01742 117 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 SUMO4Q6EEV6 95 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 UNQ9165/PRO28630Q6UXU0 137 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 CARD19Q96LW7 228 aa16.8■□□□□ 0.28
SHANK2-220ENST00000608988 LGALS9O00182 355 aa16.79■□□□□ 0.28
SHANK2-220ENST00000608988 ZNF688P0C7X2 276 aa16.79■□□□□ 0.28
SHANK2-220ENST00000608988 RHOHQ15669 191 aa16.79■□□□□ 0.28
SHANK2-220ENST00000608988 AKAP13Q12802 2813 aa16.79■□□□□ 0.28
SHANK2-220ENST00000608988 TPRP12270 2363 aaKnown RBP16.79■□□□□ 0.28
SHANK2-220ENST00000608988 LMO4P61968 165 aa16.78■□□□□ 0.28
SHANK2-220ENST00000608988 AMELXQ99217 191 aa16.78■□□□□ 0.28
SHANK2-220ENST00000608988 SMG1Q96Q15 3661 aaKnown RBP16.78■□□□□ 0.28
SHANK2-220ENST00000608988 J3QQQ9 107 aa16.78■□□□□ 0.28
SHANK2-220ENST00000608988 SPRY2O43597 315 aa16.78■□□□□ 0.28
SHANK2-220ENST00000608988 LGALS3P17931 250 aaKnown RBP16.78■□□□□ 0.28
SHANK2-220ENST00000608988 FAM159AQ6UWV7 190 aa16.78■□□□□ 0.28
SHANK2-220ENST00000608988 PIEZO2Q9H5I5 2752 aa16.77■□□□□ 0.28
SHANK2-220ENST00000608988 SPTBN2O15020 2390 aa16.77■□□□□ 0.28
SHANK2-220ENST00000608988 ANKHD1Q8IWZ3 2542 aaKnown RBP16.77■□□□□ 0.28
SHANK2-220ENST00000608988 MAP1BP46821 2468 aaKnown RBP16.77■□□□□ 0.27
SHANK2-220ENST00000608988 LEPROTO15243 131 aa16.77■□□□□ 0.27
SHANK2-220ENST00000608988 TMEM170BQ5T4T1 132 aa16.77■□□□□ 0.27
SHANK2-220ENST00000608988 CDSNQ15517 529 aa16.76■□□□□ 0.27
SHANK2-220ENST00000608988 NSUN5P1Q3KNT7 163 aa16.76■□□□□ 0.27
SHANK2-220ENST00000608988 BOD1L1Q8NFC6 3051 aa16.76■□□□□ 0.27
SHANK2-220ENST00000608988 ANKRD11Q6UB99 2663 aaPredicted RBP16.76■□□□□ 0.27
SHANK2-220ENST00000608988 TSPEAR-AS2P59090 65 aa16.76■□□□□ 0.27
SHANK2-220ENST00000608988 A0A0B4J2C4 111 aa16.75■□□□□ 0.27
SHANK2-220ENST00000608988 SDHAF1A6NFY7 115 aa16.75■□□□□ 0.27
SHANK2-220ENST00000608988 MT-ATP8P03928 68 aa16.75■□□□□ 0.27
SHANK2-220ENST00000608988 ID1P41134 155 aa16.75■□□□□ 0.27
SHANK2-220ENST00000608988 ODF3Q96PU9 254 aa16.75■□□□□ 0.27
SHANK2-220ENST00000608988 CFAP47Q6ZTR5 3102 aa16.75■□□□□ 0.27
SHANK2-220ENST00000608988 A0A0J9YX75 114 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 SCGB1C2P0DMR2 95 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 P0DMU3 169 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 FAM231AP0DMU4 169 aa16.74■□□□□ 0.27
SHANK2-220ENST00000608988 FAM231CP0DMU5 169 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms