RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TNP2Q05952 138 aa9.96□□□□□ -0.82
HDDC2-204ENST00000608295 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.82
HDDC2-204ENST00000608295 C1QBP02746 253 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 SLAQ13239 276 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 FAM162BQ5T6X4 162 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 CFAP126Q5VTH2 177 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 NEGR1Q7Z3B1 354 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 UPK3BQ9BT76 320 aa9.95□□□□□ -0.82
HDDC2-204ENST00000608295 LTAP01374 205 aa9.94□□□□□ -0.82
HDDC2-204ENST00000608295 RPL19P84098 196 aaKnown RBP9.94□□□□□ -0.82
HDDC2-204ENST00000608295 TTC32Q5I0X7 151 aa9.94□□□□□ -0.82
HDDC2-204ENST00000608295 WFDC10BQ8IUB3 73 aa9.94□□□□□ -0.82
HDDC2-204ENST00000608295 DERL1Q9BUN8 251 aa9.94□□□□□ -0.82
HDDC2-204ENST00000608295 JPT2Q9H910 190 aa9.94□□□□□ -0.82
HDDC2-204ENST00000608295 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
HDDC2-204ENST00000608295 SIVA1O15304 175 aa9.93□□□□□ -0.82
HDDC2-204ENST00000608295 RS1O15537 224 aa9.93□□□□□ -0.82
HDDC2-204ENST00000608295 GATA1P15976 413 aaPredicted RBP9.93□□□□□ -0.82
HDDC2-204ENST00000608295 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
HDDC2-204ENST00000608295 ZNF575Q86XF7 245 aa9.93□□□□□ -0.82
HDDC2-204ENST00000608295 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
HDDC2-204ENST00000608295 A0A1B0GVG6 124 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 KRBOX1C9JBD0 128 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 M0R381 172 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
HDDC2-204ENST00000608295 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 TCEAL7Q9BRU2 100 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 SAMD10Q9BYL1 202 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 PARLQ9H300 379 aa9.92□□□□□ -0.82
HDDC2-204ENST00000608295 ARMS2P0C7Q2 107 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 SULT1A2P50226 295 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 LINC00315P59091 139 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 SSTP61278 116 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 ZNF674Q2M3X9 581 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 EIF5AL1Q6IS14 154 aaKnown RBP9.91□□□□□ -0.82
HDDC2-204ENST00000608295 SLC51BQ86UW2 128 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 BAGE2Q86Y30 109 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 C9orf62Q8N4C0 152 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 TXNDC17Q9BRA2 123 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 TNFRSF18Q9Y5U5 241 aa9.91□□□□□ -0.82
HDDC2-204ENST00000608295 A0A087WWL8 130 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 MUC21A0A0G2JKD1 596 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 MUC21A0A140T8X8 626 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 RPL35P42766 123 aaKnown RBP9.9□□□□□ -0.82
HDDC2-204ENST00000608295 RHOHQ15669 191 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 LINC01559Q495D7 138 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 Q6ZSN1 163 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
HDDC2-204ENST00000608295 PKD1P98161 4303 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
HDDC2-204ENST00000608295 RAB5CP51148 216 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 GAGE1Q13065 139 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 GAGE4Q13068 117 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 GAGE5Q13069 117 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 CENPWQ5EE01 88 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 ALKAL2Q6UX46 152 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 PHLDA3Q9Y5J5 127 aa9.89□□□□□ -0.83
HDDC2-204ENST00000608295 PKHD1P08F94 4074 aa9.88□□□□□ -0.83
HDDC2-204ENST00000608295 DYNC1H1Q14204 4646 aaKnown RBP9.88□□□□□ -0.83
HDDC2-204ENST00000608295 TEX46H3BTG2 121 aa9.88□□□□□ -0.83
HDDC2-204ENST00000608295 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
HDDC2-204ENST00000608295 SYT8Q8NBV8 401 aa9.88□□□□□ -0.83
HDDC2-204ENST00000608295 LY96Q9Y6Y9 160 aa9.88□□□□□ -0.83
HDDC2-204ENST00000608295 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
HDDC2-204ENST00000608295 RAB19A4D1S5 217 aa9.87□□□□□ -0.83
HDDC2-204ENST00000608295 A8MWV9 139 aa9.87□□□□□ -0.83
HDDC2-204ENST00000608295 COX8CQ7Z4L0 72 aa9.87□□□□□ -0.83
HDDC2-204ENST00000608295 Q9UF83 564 aa9.87□□□□□ -0.83
HDDC2-204ENST00000608295 DNAH11Q96DT5 4516 aa9.87□□□□□ -0.83
HDDC2-204ENST00000608295 TRBV6-4A0A1B0GX49 114 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 IFNA1P01562 189 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 S100A9P06702 114 aaKnown RBP9.86□□□□□ -0.83
HDDC2-204ENST00000608295 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
HDDC2-204ENST00000608295 MEF2BQ02080 365 aaPredicted RBP9.86□□□□□ -0.83
HDDC2-204ENST00000608295 OR10J3Q5JRS4 329 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 OR10AG1Q8NH19 301 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 C11orf52Q96A22 123 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 TPPP3Q9BW30 176 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
HDDC2-204ENST00000608295 TRAV1-1A0A0B4J248 108 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 IGHV3-30P01768 117 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 IGHV3-33P01772 117 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 IGHV3-30-3P0DP02 117 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 IGHV3-30-5P0DP03 117 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 GZMBP10144 247 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 BCL2P10415 239 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 ZFP82Q8N141 532 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 PTH2Q96A98 100 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 MLST8Q9BVC4 326 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 MED9Q9NWA0 146 aa9.85□□□□□ -0.83
HDDC2-204ENST00000608295 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
HDDC2-204ENST00000608295 DNLZQ5SXM8 178 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms