RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 RS1O15537 224 aa11.45□□□□□ -0.58
LINC00240-203ENST00000606878 SH2D1AO60880 128 aa11.45□□□□□ -0.58
LINC00240-203ENST00000606878 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
LINC00240-203ENST00000606878 PCNPQ8WW12 178 aaKnown RBP11.45□□□□□ -0.58
LINC00240-203ENST00000606878 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
LINC00240-203ENST00000606878 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
LINC00240-203ENST00000606878 M0R036 132 aa11.44□□□□□ -0.58
LINC00240-203ENST00000606878 GYPEP15421 78 aa11.44□□□□□ -0.58
LINC00240-203ENST00000606878 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
LINC00240-203ENST00000606878 NEGR1Q7Z3B1 354 aa11.44□□□□□ -0.58
LINC00240-203ENST00000606878 IL36BQ9NZH7 164 aa11.44□□□□□ -0.58
LINC00240-203ENST00000606878 DNAH6Q9C0G6 4158 aa11.44□□□□□ -0.58
LINC00240-203ENST00000606878 K7EQD1 137 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 RTL8CO15255 209 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 IFNA1P01562 189 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 SRIP30626 198 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 ZNF506Q5JVG8 444 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 PIK3CD-AS1Q5SR53 167 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 LYPD5Q6UWN5 251 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 NHLRC2Q8NBF2 726 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 DNAH10Q8IVF4 4471 aa11.43□□□□□ -0.58
LINC00240-203ENST00000606878 GRIFINA4D1Z8 144 aa11.42□□□□□ -0.58
LINC00240-203ENST00000606878 GATA1P15976 413 aaPredicted RBP11.42□□□□□ -0.58
LINC00240-203ENST00000606878 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
LINC00240-203ENST00000606878 TMSB15BA0A087X1C1 80 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 A0A1B0GVG6 124 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 A8MWV9 139 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 ARMS2P0C7Q2 107 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 RPL35P42766 123 aaKnown RBP11.41□□□□□ -0.58
LINC00240-203ENST00000606878 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 SH2D6Q7Z4S9 175 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 SYT8Q8NBV8 401 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 PRADC1Q9BSG0 188 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 MLST8Q9BVC4 326 aa11.41□□□□□ -0.58
LINC00240-203ENST00000606878 IGHV3-73A0A0B4J1V6 119 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 TRBV6-4A0A1B0GX49 114 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 H3BVH4 76 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 PDE6DO43924 150 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.58
LINC00240-203ENST00000606878 TTC32Q5I0X7 151 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 C11orf52Q96A22 123 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 PHLDA3Q9Y5J5 127 aa11.4□□□□□ -0.58
LINC00240-203ENST00000606878 SIVA1O15304 175 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
LINC00240-203ENST00000606878 BLOC1S1P78537 153 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 C6orf223Q8N319 242 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 SLC25A29Q8N8R3 303 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 MED9Q9NWA0 146 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
LINC00240-203ENST00000606878 A0A1W2PPQ1 181 aa11.38□□□□□ -0.59
LINC00240-203ENST00000606878 NXPH4O95158 308 aa11.38□□□□□ -0.59
LINC00240-203ENST00000606878 MGST1P10620 155 aaKnown RBP11.38□□□□□ -0.59
LINC00240-203ENST00000606878 ALKAL2Q6UX46 152 aa11.38□□□□□ -0.59
LINC00240-203ENST00000606878 SCRT2Q9NQ03 307 aa11.38□□□□□ -0.59
LINC00240-203ENST00000606878 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
LINC00240-203ENST00000606878 BCL2P10415 239 aa11.37□□□□□ -0.59
LINC00240-203ENST00000606878 RHOHQ15669 191 aa11.37□□□□□ -0.59
LINC00240-203ENST00000606878 PRR27Q6MZM9 219 aa11.37□□□□□ -0.59
LINC00240-203ENST00000606878 DERL1Q9BUN8 251 aa11.37□□□□□ -0.59
LINC00240-203ENST00000606878 PARLQ9H300 379 aa11.37□□□□□ -0.59
LINC00240-203ENST00000606878 NKX2-5P52952 324 aaPredicted RBP11.36□□□□□ -0.59
LINC00240-203ENST00000606878 CENPWQ5EE01 88 aa11.36□□□□□ -0.59
LINC00240-203ENST00000606878 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
LINC00240-203ENST00000606878 M0R381 172 aa11.35□□□□□ -0.59
LINC00240-203ENST00000606878 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
LINC00240-203ENST00000606878 BTF3P20290 206 aaKnown RBP11.35□□□□□ -0.59
LINC00240-203ENST00000606878 GNG4P50150 75 aa11.35□□□□□ -0.59
LINC00240-203ENST00000606878 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
LINC00240-203ENST00000606878 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
LINC00240-203ENST00000606878 JPT2Q9H910 190 aa11.35□□□□□ -0.59
LINC00240-203ENST00000606878 TRAV9-2A0A087WT02 112 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 RHODO00212 210 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 CXCL1P09341 107 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 TIRAPP58753 221 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
LINC00240-203ENST00000606878 Q6ZSN1 163 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 SMIM12Q96EX1 92 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 SFRP2Q96HF1 295 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
LINC00240-203ENST00000606878 FRAS1Q86XX4 4008 aa11.33□□□□□ -0.6
LINC00240-203ENST00000606878 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
LINC00240-203ENST00000606878 BIN3Q9NQY0 253 aa11.33□□□□□ -0.6
LINC00240-203ENST00000606878 BIRC6Q9NR09 4857 aa11.33□□□□□ -0.6
LINC00240-203ENST00000606878 A0A1B0GVY2 172 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 RBFOX3A6NFN3 312 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 IGLV2-8P01709 118 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 UFSP1Q6NVU6 142 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
LINC00240-203ENST00000606878 LY96Q9Y6Y9 160 aa11.32□□□□□ -0.6
LINC00240-203ENST00000606878 A0A087WWL8 130 aa11.31□□□□□ -0.6
LINC00240-203ENST00000606878 K7EP13 123 aa11.31□□□□□ -0.6
LINC00240-203ENST00000606878 CRYGDP07320 174 aa11.31□□□□□ -0.6
LINC00240-203ENST00000606878 EVI2AP22794 236 aa11.31□□□□□ -0.6
LINC00240-203ENST00000606878 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms