RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TRBV6-1A0A0K0K1D8 114 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 GRIFINA4D1Z8 144 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 K7EQD1 137 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 LTAP01374 205 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 SRIP30626 198 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 SULT1A2P50226 295 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 ZNF506Q5JVG8 444 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 FAM162BQ5T6X4 162 aa9.94□□□□□ -0.82
TUBE1-208ENST00000604743 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 TEX46H3BTG2 121 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 H3BVH4 76 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 RS1O15537 224 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 CFAP126Q5VTH2 177 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 MANBALQ9NQG1 85 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 HECTD4Q9Y4D8 3996 aa9.93□□□□□ -0.82
TUBE1-208ENST00000604743 KRBOX1C9JBD0 128 aa9.92□□□□□ -0.82
TUBE1-208ENST00000604743 S100A9P06702 114 aaKnown RBP9.92□□□□□ -0.82
TUBE1-208ENST00000604743 ZNF674Q2M3X9 581 aa9.92□□□□□ -0.82
TUBE1-208ENST00000604743 LYPD5Q6UWN5 251 aa9.92□□□□□ -0.82
TUBE1-208ENST00000604743 COX8CQ7Z4L0 72 aa9.92□□□□□ -0.82
TUBE1-208ENST00000604743 BAGE2Q86Y30 109 aa9.92□□□□□ -0.82
TUBE1-208ENST00000604743 C9orf62Q8N4C0 152 aa9.92□□□□□ -0.82
TUBE1-208ENST00000604743 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
TUBE1-208ENST00000604743 NXPH4O95158 308 aa9.91□□□□□ -0.82
TUBE1-208ENST00000604743 ARMS2P0C7Q2 107 aa9.91□□□□□ -0.82
TUBE1-208ENST00000604743 GATA1P15976 413 aaPredicted RBP9.91□□□□□ -0.82
TUBE1-208ENST00000604743 C6orf223Q8N319 242 aa9.91□□□□□ -0.82
TUBE1-208ENST00000604743 SIVA1O15304 175 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 PRR27Q6MZM9 219 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 PTH2Q96A98 100 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 TXNDC17Q9BRA2 123 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
TUBE1-208ENST00000604743 RPL35P42766 123 aaKnown RBP9.89□□□□□ -0.83
TUBE1-208ENST00000604743 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
TUBE1-208ENST00000604743 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
TUBE1-208ENST00000604743 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
TUBE1-208ENST00000604743 DERL1Q9BUN8 251 aa9.89□□□□□ -0.83
TUBE1-208ENST00000604743 JPT2Q9H910 190 aa9.89□□□□□ -0.83
TUBE1-208ENST00000604743 PKD1P98161 4303 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 A8MWV9 139 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 CIDEAO60543 219 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 IFNA1P01562 189 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 NKX2-5P52952 324 aaPredicted RBP9.88□□□□□ -0.83
TUBE1-208ENST00000604743 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
TUBE1-208ENST00000604743 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 ALKAL2Q6UX46 152 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 SYT8Q8NBV8 401 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 PARLQ9H300 379 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
TUBE1-208ENST00000604743 A0A1B0GVY2 172 aa9.87□□□□□ -0.83
TUBE1-208ENST00000604743 M0R381 172 aa9.87□□□□□ -0.83
TUBE1-208ENST00000604743 RHOHQ15669 191 aa9.87□□□□□ -0.83
TUBE1-208ENST00000604743 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
TUBE1-208ENST00000604743 SAMD10Q9BYL1 202 aa9.87□□□□□ -0.83
TUBE1-208ENST00000604743 TRBV6-4A0A1B0GX49 114 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 A0A1W2PPQ1 181 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 RAB19A4D1S5 217 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
TUBE1-208ENST00000604743 MEF2BQ02080 365 aaPredicted RBP9.86□□□□□ -0.83
TUBE1-208ENST00000604743 TNP2Q05952 138 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 FAM74A4Q5TZK3 123 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 Q6ZSN1 163 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 ZNF575Q86XF7 245 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 C11orf52Q96A22 123 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
TUBE1-208ENST00000604743 BCL2P10415 239 aa9.85□□□□□ -0.83
TUBE1-208ENST00000604743 CENPWQ5EE01 88 aa9.85□□□□□ -0.83
TUBE1-208ENST00000604743 PIK3CD-AS1Q5SR53 167 aa9.85□□□□□ -0.83
TUBE1-208ENST00000604743 SH2D6Q7Z4S9 175 aa9.85□□□□□ -0.83
TUBE1-208ENST00000604743 BOLA1Q9Y3E2 137 aa9.85□□□□□ -0.83
TUBE1-208ENST00000604743 A0A087WWL8 130 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 PDE6DO43924 150 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 SSTP61278 116 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 ZFP2Q6ZN57 461 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 ZFP82Q8N141 532 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 SCRT2Q9NQ03 307 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 VAX2Q9UIW0 290 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 LY96Q9Y6Y9 160 aa9.84□□□□□ -0.83
TUBE1-208ENST00000604743 MUC21A0A0G2JKD1 596 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 GAGE12JA6NER3 117 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 GNG4P50150 75 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 LINC00315P59091 139 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 BLOC1S1P78537 153 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 GAGE1Q13065 139 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 GAGE4Q13068 117 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 GAGE5Q13069 117 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 GAGE13Q4V321 117 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 C14orf178Q8N769 122 aaPredicted RBP9.83□□□□□ -0.84
TUBE1-208ENST00000604743 DAZAP1Q96EP5 407 aaKnown RBP9.83□□□□□ -0.84
TUBE1-208ENST00000604743 SFRP2Q96HF1 295 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
TUBE1-208ENST00000604743 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
TUBE1-208ENST00000604743 IGLV2-8P01709 118 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms