RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE7O76087 117 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE12FP0CL80 117 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE12GP0CL81 117 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE12IP0CL82 117 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE4Q13068 117 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 IGF1P05019 195 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
CDCA3-212ENST00000604599 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 ARL3P36405 182 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 HERVK_113P61574 105 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 NPBQ8NG41 125 aa9.47□□□□□ -0.89
CDCA3-212ENST00000604599 RNF223E7ERA6 249 aa9.46□□□□□ -0.89
CDCA3-212ENST00000604599 S100A4P26447 101 aaKnown RBP9.46□□□□□ -0.9
CDCA3-212ENST00000604599 TSHBP01222 138 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 IFITM1P13164 125 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 RPL32P62910 135 aaKnown RBP9.45□□□□□ -0.9
CDCA3-212ENST00000604599 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 C1orf122Q6ZSJ8 110 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 TP53TG1Q9Y2A0 90 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 RELNP78509 3460 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 A4D1N5 150 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 E7EQL1 145 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 CLEC3BP05452 202 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 Q8N1Y9 231 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 TIMD4Q96H15 378 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 A0A0G2JNJ9 132 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 ELANEP08246 267 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 ASIPP42127 132 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
CDCA3-212ENST00000604599 Q9UFV3 132 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 PIEZO2Q9H5I5 2752 aa9.45□□□□□ -0.9
CDCA3-212ENST00000604599 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
CDCA3-212ENST00000604599 EIF4EBP3O60516 100 aaPredicted RBP9.44□□□□□ -0.9
CDCA3-212ENST00000604599 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
CDCA3-212ENST00000604599 PHLDA3Q9Y5J5 127 aa9.44□□□□□ -0.9
CDCA3-212ENST00000604599 Q1RN00 199 aa9.44□□□□□ -0.9
CDCA3-212ENST00000604599 BEX4Q9NWD9 120 aaPredicted RBP9.44□□□□□ -0.9
CDCA3-212ENST00000604599 SPTBN2O15020 2390 aa9.44□□□□□ -0.9
CDCA3-212ENST00000604599 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
CDCA3-212ENST00000604599 CLPSL1A2RUU4 121 aa9.43□□□□□ -0.9
CDCA3-212ENST00000604599 ECSCRQ19T08 205 aa9.43□□□□□ -0.9
CDCA3-212ENST00000604599 FAM110AQ9BQ89 295 aa9.43□□□□□ -0.9
CDCA3-212ENST00000604599 ASH1LQ9NR48 2969 aaKnown RBP9.43□□□□□ -0.9
CDCA3-212ENST00000604599 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 DEFB1P60022 68 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 TCF15Q12870 199 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 ACACAQ13085 2346 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 J3QQQ9 107 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 C15orf53Q8NAA6 179 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 ODF3Q96PU9 254 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 IGHV3-64A0A075B6Q5 118 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
CDCA3-212ENST00000604599 PMVKQ15126 192 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 AMELXQ99217 191 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 PRO3102Q9H379 93 aa9.42□□□□□ -0.9
CDCA3-212ENST00000604599 TRAV8-4A0A0B4J246 113 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 LY6HO94772 140 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 FAM57AQ8TBR7 257 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 MUC4Q99102 2169 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 PAPPA-AS1Q5QFB9 102 aa9.41□□□□□ -0.9
CDCA3-212ENST00000604599 SPTBN1Q01082 2364 aaKnown RBP9.4□□□□□ -0.9
CDCA3-212ENST00000604599 IGIPA6NJ69 53 aa9.4□□□□□ -0.9
CDCA3-212ENST00000604599 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
CDCA3-212ENST00000604599 PIP4P1Q86T03 277 aa9.4□□□□□ -0.9
CDCA3-212ENST00000604599 GPHB5Q86YW7 130 aa9.4□□□□□ -0.9
CDCA3-212ENST00000604599 TMEM263Q8WUH6 116 aaKnown RBP9.4□□□□□ -0.9
CDCA3-212ENST00000604599 GNRH2O43555 120 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 CENPVL3A0A0U1RRI6 287 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 PLA2G2CQ5R387 149 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 MUSTN1Q8IVN3 82 aa9.39□□□□□ -0.91
CDCA3-212ENST00000604599 ANKRD11Q6UB99 2663 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-212ENST00000604599 ZFAND2AQ8N6M9 145 aa9.38□□□□□ -0.91
CDCA3-212ENST00000604599 METTL26Q96S19 204 aa9.38□□□□□ -0.91
CDCA3-212ENST00000604599 RIF1Q5UIP0 2472 aaKnown RBP9.38□□□□□ -0.91
CDCA3-212ENST00000604599 IGHV1-69DA0A0B4J2H0 117 aa9.38□□□□□ -0.91
CDCA3-212ENST00000604599 M0QXV9 152 aa9.38□□□□□ -0.91
CDCA3-212ENST00000604599 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
CDCA3-212ENST00000604599 OPRPNQ99935 248 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-212ENST00000604599 JPT2Q9H910 190 aa9.38□□□□□ -0.91
CDCA3-212ENST00000604599 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 H3BMM0 161 aa9.37□□□□□ -0.91
CDCA3-212ENST00000604599 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms