RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	IGKC	P01834	107 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	NMU	P48645	174 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	CLEC19A	Q6UXS0	136 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	C8orf86	Q6ZUL3	223 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	RAB37	Q96AX2	223 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	SPCS1	Q9Y6A9	102 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	IGHV3OR16-8	A0A075B7F1	116 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	TMEM238	C9JI98	176 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	SMIM13	P0DJ93	91 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	SMIM17	P0DL12	118 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	C19orf54	Q5BKX5	351 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	C5orf56	Q8N8D9	126 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	TMEM158	Q8WZ71	300 aa		11.72	□□□□□ -0.53
CELF4-223	ENST00000603232	FAM223B	A6NKX1	122 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	DPM2	O94777	84 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	C9orf139	Q6ZV77	190 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	WFDC3	Q8IUB2	231 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	FAM223A	Q8IWN6	122 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	MRAP2	Q96G30	205 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	C18orf15	Q96N68	181 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	TMEM160	Q9NX00	188 aa		11.71	□□□□□ -0.53
CELF4-223	ENST00000603232	BRI3	O95415	125 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	PRSS1	P07477	247 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	FXYD2	P54710	66 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	LAGE3	Q14657	143 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232		K7EMI3	77 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	ATP5G2	Q06055	141 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	SAMD5	Q5TGI4	173 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	GLMP	Q8WWB7	406 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	TM2D2	Q9BX73	214 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232	SELENOK	Q9Y6D0	94 aa		11.7	□□□□□ -0.54
CELF4-223	ENST00000603232		G3V318	75 aa		11.69	□□□□□ -0.54
CELF4-223	ENST00000603232	TRGV3	P03979	118 aa		11.69	□□□□□ -0.54
CELF4-223	ENST00000603232	GATA1	P15976	413 aa	Predicted RBP	11.69	□□□□□ -0.54
CELF4-223	ENST00000603232	DEFB112	Q30KQ8	113 aa		11.69	□□□□□ -0.54
CELF4-223	ENST00000603232	FABP2	P12104	132 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	PPIF	P30405	207 aa	Known RBP	11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	MYOZ3	Q8TDC0	251 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	LINC00477	Q96M19	166 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	LINC01548	A6NM66	108 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	SRD5A1	P18405	259 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	TAL2	Q16559	108 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	CHAC1	Q9BUX1	264 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	TTTY13	Q9BZ97	58 aa		11.68	□□□□□ -0.54
CELF4-223	ENST00000603232	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.68	□□□□□ -0.54
CELF4-223	ENST00000603232		A0A087WX48	190 aa		11.67	□□□□□ -0.54
CELF4-223	ENST00000603232	TRAV12-1	A0A0B4J245	112 aa		11.67	□□□□□ -0.54
CELF4-223	ENST00000603232	MED14OS	P0DP75	135 aa		11.67	□□□□□ -0.54
CELF4-223	ENST00000603232	MOB4	Q9Y3A3	225 aa		11.67	□□□□□ -0.54
CELF4-223	ENST00000603232	TRBV25-1	A0A075B6N4	114 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	IGHV3-66	A0A0C4DH42	116 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	ZC2HC1B	Q5TFG8	222 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	SPANXN1	Q5VSR9	72 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	TRAV41	A0A0B4J266	112 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	TRBV7-9	A0A0J9YWB2	115 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	CRLF1	O75462	422 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	GCSH	P23434	173 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	PLN	P26678	52 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	TM4SF20	Q53R12	229 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232	NF1	P21359	2839 aa		11.66	□□□□□ -0.54
CELF4-223	ENST00000603232		E9PLD3	99 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	LINC01619	G3V211	115 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	OVOL1	O14753	267 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	APRG1	Q8IVJ8	170 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	CEND1	Q8N111	149 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	C16orf92	Q96LL3	132 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	DUX5	Q96PT3	197 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	C20orf78	Q9BR46	151 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232	SMIM2	Q9BVW6	85 aa		11.65	□□□□□ -0.54
CELF4-223	ENST00000603232		H3BUA1	57 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	NDUFA4	O00483	81 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	ORMDL2	Q53FV1	153 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	TEX29	Q8N6K0	151 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	JMJD1C	Q15652	2540 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	TRAV21	A0A0B4J279	112 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232		M0R381	172 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	SOCS3	O14543	225 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	IGF1	P05019	195 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	GTSCR1	Q86UQ5	136 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	ZFAND2A	Q8N6M9	145 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	MAPKAPK5-AS1	Q8N8E1	139 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	FAM19A4	Q96LR4	140 aa		11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	MRPL35	Q9NZE8	188 aa	Known RBP	11.64	□□□□□ -0.55
CELF4-223	ENST00000603232	IGHV3OR16-13	A0A075B7E8	117 aa		11.63	□□□□□ -0.55
CELF4-223	ENST00000603232	IGHV3-74	A0A0B4J1X5	117 aa		11.63	□□□□□ -0.55
CELF4-223	ENST00000603232		K7ERJ3	54 aa		11.63	□□□□□ -0.55
CELF4-223	ENST00000603232	IGHV4-59	P01825	116 aa		11.63	□□□□□ -0.55
CELF4-223	ENST00000603232	UFC1	Q9Y3C8	167 aa		11.63	□□□□□ -0.55
CELF4-223	ENST00000603232		F8VRH5	84 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	ARL3	P36405	182 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	PRR9	Q5T870	116 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	GPHB5	Q86YW7	130 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	TEX48	A0A1B0GUV7	120 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	IGLL5	B9A064	214 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232		H3BUX3	64 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232		H3BVH4	76 aa		11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	HOXA3	O43365	443 aa	Predicted RBP	11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	ZNF207	O43670	478 aa	Known RBP	11.62	□□□□□ -0.55
CELF4-223	ENST00000603232	LY6E	Q16553	131 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms