RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ORMDL2Q53FV1 153 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 AGRNO00468 2067 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 HLA-DRB4P13762 266 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 ATP5J2P56134 94 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 CLEC2AQ6UVW9 174 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 TOMM6Q96B49 74 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 DAZ1Q9NQZ3 744 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 HLA-DRB4X5D2U9 266 aa15.23■□□□□ 0.03
SHKBP1-225ENST00000600733 F8VRH5 84 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 IGLV1-40P01703 118 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 TMEM95Q3KNT9 176 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 SAMD5Q5TGI4 173 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 CEND1Q8N111 149 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 C20orf78Q9BR46 151 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 H7C1H1 209 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 APRG1Q8IVJ8 170 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 WFDC12Q8WWY7 111 aa15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 NHP2Q9NX24 153 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 UTP20O75691 2785 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-225ENST00000600733 TRAV12-1A0A0B4J245 112 aa15.21■□□□□ 0.03
SHKBP1-225ENST00000600733 K7ERU9 68 aa15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 AVPP01185 164 aa15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 MSMBP08118 114 aa15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 FABP2P12104 132 aa15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 TM2D2Q9BX73 214 aa15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 NEGR1Q7Z3B1 354 aa15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 PHLDA1Q8WV24 401 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 CHTOPQ9Y3Y2 248 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-225ENST00000600733 MED14OSP0DP75 135 aa15.19■□□□□ 0.02
SHKBP1-225ENST00000600733 C2orf66Q6UXQ4 117 aa15.19■□□□□ 0.02
SHKBP1-225ENST00000600733 NEXN-AS1Q8NBZ9 246 aa15.19■□□□□ 0.02
SHKBP1-225ENST00000600733 NDUFS8O00217 210 aa15.19■□□□□ 0.02
SHKBP1-225ENST00000600733 SLC25A16P16260 332 aa15.18■□□□□ 0.02
SHKBP1-225ENST00000600733 DEFB104AQ8WTQ1 72 aa15.18■□□□□ 0.02
SHKBP1-225ENST00000600733 CFHR3Q02985 330 aa15.18■□□□□ 0.02
SHKBP1-225ENST00000600733 CSTL1Q9H114 145 aa15.18■□□□□ 0.02
SHKBP1-225ENST00000600733 OR5A1Q8NGJ0 315 aa15.17■□□□□ 0.02
SHKBP1-225ENST00000600733 BAALCQ8WXS3 180 aa15.17■□□□□ 0.02
SHKBP1-225ENST00000600733 JPT2Q9H910 190 aa15.17■□□□□ 0.02
SHKBP1-225ENST00000600733 USP9XQ93008 2570 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-225ENST00000600733 TRBV7-9A0A0J9YWB2 115 aa15.17■□□□□ 0.02
SHKBP1-225ENST00000600733 KLLNB2CW77 178 aa15.17■□□□□ 0.02
SHKBP1-225ENST00000600733 DCANP1Q8TF63 244 aa15.16■□□□□ 0.02
SHKBP1-225ENST00000600733 LINC00315P59091 139 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 KIF25-AS1Q9Y6Z4 181 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 OR11H12B2RN74 326 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 NXPH4O95158 308 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 C10orf99Q6UWK7 81 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 FAM159AQ6UWV7 190 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 OR11H1Q8NG94 326 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 OR11H2Q8NH07 326 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 HIST1H4GQ99525 98 aa15.15■□□□□ 0.02
SHKBP1-225ENST00000600733 DOPEY1Q5JWR5 2465 aa15.14■□□□□ 0.01
SHKBP1-225ENST00000600733 TRAV12-3A0A0B4J271 114 aa15.14■□□□□ 0.01
SHKBP1-225ENST00000600733 PRSS29PA6NIE9 313 aa15.14■□□□□ 0.01
SHKBP1-225ENST00000600733 A0A087WWL8 130 aa15.13■□□□□ 0.01
SHKBP1-225ENST00000600733 MYMXA0A1B0GTQ4 84 aa15.13■□□□□ 0.01
SHKBP1-225ENST00000600733 DUSP14O95147 198 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-225ENST00000600733 POM121L12Q8N7R1 296 aa15.13■□□□□ 0.01
SHKBP1-225ENST00000600733 NRGNQ92686 78 aa15.13■□□□□ 0.01
SHKBP1-225ENST00000600733 ZANQ9Y493 2812 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 K7EMT4 169 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 CD7P09564 240 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 ID1P41134 155 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 TAL2Q16559 108 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 PPP1R17O96001 155 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 IGHV4-59P01825 116 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 PSMB8P28062 276 aa15.12■□□□□ 0.01
SHKBP1-225ENST00000600733 DOPEY2Q9Y3R5 2298 aa15.11■□□□□ 0.01
SHKBP1-225ENST00000600733 B4DSR2 109 aa15.11■□□□□ 0.01
SHKBP1-225ENST00000600733 ZNF688P0C7X2 276 aa15.11■□□□□ 0.01
SHKBP1-225ENST00000600733 C12orf74Q32Q52 190 aa15.11■□□□□ 0.01
SHKBP1-225ENST00000600733 SUMO4Q6EEV6 95 aa15.11■□□□□ 0.01
SHKBP1-225ENST00000600733 TRBV7-3A0A075B6L6 115 aa15.1■□□□□ 0.01
SHKBP1-225ENST00000600733 IGKV3-20P01619 116 aa15.1■□□□□ 0.01
SHKBP1-225ENST00000600733 IGSF10Q6WRI0 2623 aa15.1■□□□□ 0.01
SHKBP1-225ENST00000600733 IGLL5B9A064 214 aa15.1■□□□□ 0.01
SHKBP1-225ENST00000600733 PRADC1Q9BSG0 188 aa15.1■□□□□ 0.01
SHKBP1-225ENST00000600733 PIEZO1Q92508 2521 aa15.1■□□□□ 0.01
SHKBP1-225ENST00000600733 IGHV4OR15-8A0A075B7B6 117 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 A0A087WW49 117 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 E9PLD3 99 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 CRYGDP07320 174 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 TP53TG1Q9Y2A0 90 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 USP9YO00507 2555 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 SORL1Q92673 2214 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 TRAV12-2A0A075B6T6 113 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 F5H697 171 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 G3V4G9 280 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 TSHBP01222 138 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 LGALS1P09382 135 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 DEFB112Q30KQ8 113 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 CYSLTR1Q9Y271 337 aa15.09■□□□□ 0.01
SHKBP1-225ENST00000600733 EMP1P54849 157 aa15.08■□□□□ 0
SHKBP1-225ENST00000600733 RPL39P62891 51 aaKnown RBP15.08■□□□□ 0
SHKBP1-225ENST00000600733 POLR2KP53803 58 aaKnown RBP15.08■□□□□ 0
SHKBP1-225ENST00000600733 RIPPLY3P57055 190 aa15.08■□□□□ 0
SHKBP1-225ENST00000600733 ZFP2Q6ZN57 461 aa15.08■□□□□ 0
SHKBP1-225ENST00000600733 ZNF479Q96JC4 524 aa15.08■□□□□ 0
SHKBP1-225ENST00000600733 FAM74A4Q5TZK3 123 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms