RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 PGPA6NDG6 321 aa11.5□□□□□ -0.57
SMG9-210ENST00000600097 J3QL48 77 aa11.5□□□□□ -0.57
SMG9-210ENST00000600097 GNRH2O43555 120 aa11.5□□□□□ -0.57
SMG9-210ENST00000600097 PFN1P07737 140 aaKnown RBP11.5□□□□□ -0.57
SMG9-210ENST00000600097 GATA1P15976 413 aaPredicted RBP11.5□□□□□ -0.57
SMG9-210ENST00000600097 EIF5AL1Q6IS14 154 aaKnown RBP11.5□□□□□ -0.57
SMG9-210ENST00000600097 ARL6IP6Q8N6S5 226 aa11.5□□□□□ -0.57
SMG9-210ENST00000600097 SUN5Q8TC36 379 aa11.5□□□□□ -0.57
SMG9-210ENST00000600097 TRAV21A0A0B4J279 112 aa11.49□□□□□ -0.57
SMG9-210ENST00000600097 STOML3Q8TAV4 291 aa11.49□□□□□ -0.57
SMG9-210ENST00000600097 KCNS1Q96KK3 526 aa11.49□□□□□ -0.57
SMG9-210ENST00000600097 A0A1B0GVG6 124 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 FBLL1A6NHQ2 334 aaKnown RBP11.48□□□□□ -0.57
SMG9-210ENST00000600097 CIDEAO60543 219 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 ZFP69Q49AA0 526 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 OR10J3Q5JRS4 329 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 DPPA3Q6W0C5 159 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 PRADC1Q9BSG0 188 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 Q9HAA7 133 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
SMG9-210ENST00000600097 TYMSP04818 313 aa11.47□□□□□ -0.57
SMG9-210ENST00000600097 ZNF726P1Q15940 193 aa11.47□□□□□ -0.57
SMG9-210ENST00000600097 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
SMG9-210ENST00000600097 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 MAP1LC3B2A6NCE7 125 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.57
SMG9-210ENST00000600097 LAGE3Q14657 143 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 RHOHQ15669 191 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 SLC51BQ86UW2 128 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 TM2D2Q9BX73 214 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 NKX6-2Q9C056 277 aaPredicted RBP11.46□□□□□ -0.57
SMG9-210ENST00000600097 MAP1LC3BQ9GZQ8 125 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 TREM1Q9NP99 234 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 FAM30AQ9NZY2 134 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 RPH3ALQ9UNE2 315 aa11.46□□□□□ -0.57
SMG9-210ENST00000600097 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
SMG9-210ENST00000600097 K7EQM0 130 aa11.45□□□□□ -0.58
SMG9-210ENST00000600097 ZNF876PQ49A33 203 aa11.45□□□□□ -0.58
SMG9-210ENST00000600097 LELP1Q5T871 98 aa11.45□□□□□ -0.58
SMG9-210ENST00000600097 GOLT1AQ6ZVE7 132 aa11.45□□□□□ -0.58
SMG9-210ENST00000600097 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
SMG9-210ENST00000600097 IGHV3-30P01768 117 aa11.44□□□□□ -0.58
SMG9-210ENST00000600097 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
SMG9-210ENST00000600097 IGHV3-30-3P0DP02 117 aa11.44□□□□□ -0.58
SMG9-210ENST00000600097 IGHV3-30-5P0DP03 117 aa11.44□□□□□ -0.58
SMG9-210ENST00000600097 RAB5CP51148 216 aa11.44□□□□□ -0.58
SMG9-210ENST00000600097 FGF8P55075 233 aaPredicted RBP11.44□□□□□ -0.58
SMG9-210ENST00000600097 FAM213BQ8TBF2 198 aa11.44□□□□□ -0.58
SMG9-210ENST00000600097 F6UZH7 168 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 FHITP49789 147 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 SUMO1P63165 101 aaKnown RBP11.43□□□□□ -0.58
SMG9-210ENST00000600097 CFAP126Q5VTH2 177 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 MBD3L1Q8WWY6 194 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 GTSF1LQ9H1H1 148 aa11.43□□□□□ -0.58
SMG9-210ENST00000600097 TRAV8-1A0A0A6YYK1 113 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 RS1O15537 224 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 H2AFB1P0C5Y9 115 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 Q6ZSA8 131 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 ATP6V0E2Q8NHE4 81 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 SFT2D1Q8WV19 159 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
SMG9-210ENST00000600097 KRTAP29-1A8MX34 341 aaPredicted RBP11.41□□□□□ -0.58
SMG9-210ENST00000600097 TEX46H3BTG2 121 aa11.41□□□□□ -0.58
SMG9-210ENST00000600097 TCRAP04437 139 aa11.41□□□□□ -0.58
SMG9-210ENST00000600097 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
SMG9-210ENST00000600097 UBE2G2P60604 165 aa11.41□□□□□ -0.58
SMG9-210ENST00000600097 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
SMG9-210ENST00000600097 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 IFNA7P01567 189 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 GNG5P63218 68 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 DEFB104AQ8WTQ1 72 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 PTH2Q96A98 100 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
SMG9-210ENST00000600097 IGHV3-73A0A0B4J1V6 119 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 FAM74A7A6NL05 159 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 SULT1A2P50226 295 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 TOR2AQ5JU69 321 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 CYB561D1Q8N8Q1 229 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 TCEAL7Q9BRU2 100 aa11.39□□□□□ -0.59
SMG9-210ENST00000600097 WFDC2Q14508 124 aa11.38□□□□□ -0.59
SMG9-210ENST00000600097 HIST1H2BAQ96A08 127 aa11.38□□□□□ -0.59
SMG9-210ENST00000600097 C9orf85Q96MD7 179 aa11.38□□□□□ -0.59
SMG9-210ENST00000600097 ZNF506Q5JVG8 444 aa11.37□□□□□ -0.59
SMG9-210ENST00000600097 CST9LP1Q5W188 147 aa11.37□□□□□ -0.59
SMG9-210ENST00000600097 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
SMG9-210ENST00000600097 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
SMG9-210ENST00000600097 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
SMG9-210ENST00000600097 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
SMG9-210ENST00000600097 A0A1B0GV50 99 aa11.36□□□□□ -0.59
SMG9-210ENST00000600097 PGPEP1LA6NFU8 196 aa11.36□□□□□ -0.59
SMG9-210ENST00000600097 GCGP01275 180 aa11.36□□□□□ -0.59
SMG9-210ENST00000600097 ZNF80P51504 273 aaPredicted RBP11.36□□□□□ -0.59
SMG9-210ENST00000600097 FLI1Q01543 452 aaPredicted RBP11.36□□□□□ -0.59
SMG9-210ENST00000600097 SGK494Q96LW2 274 aa11.36□□□□□ -0.59
SMG9-210ENST00000600097 PSG8Q9UQ74 426 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms